Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | GTW28_RS01980 | Genome accession | NZ_CP047485 |
| Coordinates | 363218..363667 (-) | Length | 149 a.a. |
| NCBI ID | WP_003234608.1 | Uniprot ID | A0A8E0S750 |
| Organism | Bacillus subtilis strain BJQ0005 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 358218..368667
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTW28_RS01940 (GTW28_01940) | - | 358662..358857 (+) | 196 | Protein_335 | hypothetical protein | - |
| GTW28_RS01945 (GTW28_01945) | - | 358897..359211 (+) | 315 | Protein_336 | RDD family protein | - |
| GTW28_RS01950 (GTW28_01950) | yckD | 359293..359625 (+) | 333 | WP_015252849.1 | YckD family protein | - |
| GTW28_RS01955 (GTW28_01955) | - | 359753..360175 (+) | 423 | WP_174616579.1 | MarR family transcriptional regulator | - |
| GTW28_RS01960 (GTW28_01960) | - | 360163..360504 (+) | 342 | WP_032724911.1 | DUF3147 family protein | - |
| GTW28_RS01965 (GTW28_01965) | - | 360523..361251 (+) | 729 | WP_046380777.1 | AAA family ATPase | - |
| GTW28_RS01970 (GTW28_01970) | bglC | 361323..362756 (+) | 1434 | WP_046380778.1 | 6-phospho-beta-glucosidase | - |
| GTW28_RS01975 (GTW28_01975) | nin/comJ | 362793..363191 (-) | 399 | WP_015715226.1 | DNA-entry nuclease inhibitor | Regulator |
| GTW28_RS01980 (GTW28_01980) | nucA/comI | 363218..363667 (-) | 450 | WP_003234608.1 | DNA-entry nuclease | Machinery gene |
| GTW28_RS01985 (GTW28_01985) | tlpC | 363835..365556 (-) | 1722 | WP_046380779.1 | methyl-accepting chemotaxis protein TlpC | - |
| GTW28_RS01990 (GTW28_01990) | hxlB | 365667..366224 (-) | 558 | WP_003234605.1 | 6-phospho-3-hexuloisomerase | - |
| GTW28_RS01995 (GTW28_01995) | hxlA | 366230..366862 (-) | 633 | WP_003234604.1 | 3-hexulose-6-phosphate synthase | - |
| GTW28_RS02000 (GTW28_02000) | hxlR | 367091..367453 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16470.42 Da Isoelectric Point: 4.5282
>NTDB_id=413645 GTW28_RS01980 WP_003234608.1 363218..363667(-) (nucA/comI) [Bacillus subtilis strain BJQ0005]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSTDQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSTDQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=413645 GTW28_RS01980 WP_003234608.1 363218..363667(-) (nucA/comI) [Bacillus subtilis strain BJQ0005]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGTCTGATAAA
AGGAGACTTTTTTTCAACTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGACACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGTCTGATAAA
AGGAGACTTTTTTTCAACTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGACACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
97.987 |
100 |
0.98 |