Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RTA_RS17480 Genome accession   NC_015677
Coordinates   3633895..3634293 (-) Length   132 a.a.
NCBI ID   WP_013902761.1    Uniprot ID   F5XZH3
Organism   Ramlibacter tataouinensis TTB310     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3628895..3639293
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RTA_RS17465 (Rta_34140) - 3630682..3632952 (-) 2271 WP_013902758.1 methyl-accepting chemotaxis protein -
  RTA_RS17470 (Rta_34150) - 3632974..3633504 (-) 531 WP_013902759.1 chemotaxis protein CheW -
  RTA_RS17475 (Rta_34160) - 3633530..3633895 (-) 366 WP_013902760.1 response regulator transcription factor -
  RTA_RS17480 (Rta_34170) pilG 3633895..3634293 (-) 399 WP_013902761.1 PleD family two-component system response regulator Regulator
  RTA_RS20470 - 3634362..3634514 (-) 153 WP_264362965.1 rubredoxin -
  RTA_RS17485 (Rta_34180) - 3634632..3635564 (+) 933 WP_041676556.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  RTA_RS17490 (Rta_34190) hemL 3635616..3636914 (+) 1299 WP_013902763.1 glutamate-1-semialdehyde 2,1-aminomutase -
  RTA_RS17495 (Rta_34200) - 3636947..3638515 (-) 1569 WP_013902764.1 hypothetical protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14615.79 Da        Isoelectric Point: 5.8561

>NTDB_id=41355 RTA_RS17480 WP_013902761.1 3633895..3634293(-) (pilG) [Ramlibacter tataouinensis TTB310]
MSTTGSAFKVLVIDDSNTIRRSAEIFLKQGGHEVMLAEDGFDALAKVNDYQPNLIFCDILMPRLDGYQTCAIIKRNARFA
SVPVVMLSSKDGVFDKARGRMVGSEDYLTKPFTKDQLLQTVQQFGSAQEGVM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=41355 RTA_RS17480 WP_013902761.1 3633895..3634293(-) (pilG) [Ramlibacter tataouinensis TTB310]
GTGAGCACGACCGGATCAGCGTTCAAGGTGCTGGTGATCGACGACAGCAACACGATCCGGCGCAGCGCCGAGATCTTCCT
GAAGCAGGGCGGCCACGAGGTCATGCTGGCCGAGGATGGTTTCGATGCCCTGGCCAAGGTCAACGATTACCAGCCGAACC
TGATCTTCTGCGACATCCTGATGCCCCGGCTCGACGGCTACCAGACCTGCGCCATCATCAAGCGCAATGCCCGGTTCGCG
TCCGTGCCCGTGGTGATGCTGTCGTCCAAGGATGGTGTGTTCGACAAGGCCCGCGGCCGCATGGTCGGCTCCGAGGACTA
CCTCACCAAACCGTTTACCAAGGACCAACTGCTCCAGACCGTCCAGCAGTTCGGCTCCGCCCAAGAAGGAGTGATGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F5XZH3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

57.5

90.909

0.523

Multiple sequence alignment