Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   FHE72_RS24425 Genome accession   NZ_CP047394
Coordinates   1287371..1287775 (+) Length   134 a.a.
NCBI ID   WP_350448828.1    Uniprot ID   -
Organism   Rossellomorea vietnamensis strain 151-6     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1282371..1292775
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FHE72_RS06635 (FHE72_06635) - 1282742..1284367 (-) 1626 WP_252189311.1 AarF/UbiB family protein -
  FHE72_RS06640 (FHE72_06640) - 1284585..1284926 (+) 342 WP_159361637.1 VOC family protein -
  FHE72_RS06645 (FHE72_06645) - 1285293..1285793 (+) 501 WP_159361638.1 DoxX family protein -
  FHE72_RS06650 (FHE72_06650) - 1285888..1286073 (-) 186 WP_034762557.1 YfhD family protein -
  FHE72_RS06655 (FHE72_06655) - 1286177..1286302 (-) 126 WP_159361639.1 YfhE family protein -
  FHE72_RS06660 (FHE72_06660) - 1286374..1287279 (-) 906 WP_159361640.1 TIGR01777 family oxidoreductase -
  FHE72_RS24425 recX 1287371..1287775 (+) 405 WP_350448828.1 RecX family transcriptional regulator Regulator
  FHE72_RS24430 - 1287772..1288176 (+) 405 WP_350448829.1 RecX family transcriptional regulator -
  FHE72_RS06670 (FHE72_06670) - 1288217..1288630 (+) 414 WP_034762563.1 hypothetical protein -
  FHE72_RS06675 (FHE72_06675) - 1288672..1289343 (-) 672 WP_159361641.1 SDR family oxidoreductase -
  FHE72_RS06680 (FHE72_06680) - 1289697..1290023 (+) 327 WP_061810819.1 YfhH family protein -
  FHE72_RS06685 (FHE72_06685) - 1290061..1290219 (-) 159 WP_079531087.1 YpzG family protein -
  FHE72_RS06690 (FHE72_06690) - 1290251..1290415 (-) 165 WP_034762570.1 small, acid-soluble spore protein K -
  FHE72_RS06695 (FHE72_06695) - 1290567..1290842 (+) 276 WP_034762572.1 YfhJ family protein -
  FHE72_RS06700 (FHE72_06700) - 1290885..1291871 (-) 987 WP_034762575.1 metal-dependent hydrolase -
  FHE72_RS06705 (FHE72_06705) - 1291959..1292267 (+) 309 WP_034762577.1 hypothetical protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 15670.77 Da        Isoelectric Point: 5.0784

>NTDB_id=413281 FHE72_RS24425 WP_350448828.1 1287371..1287775(+) (recX) [Rossellomorea vietnamensis strain 151-6]
MGKITKITKQVKNEERYNLFIDGKYSFSVDEAVLAKFQLRKGLEVDELEISELQYEDDVKKAFNKAIQYLAYRMRTEKEI
RDHLQEGDPEEGIIQEVIHKLNEIKYINDLEFAHAFVGTQMNTADKGPTWIRGN

Nucleotide


Download         Length: 405 bp        

>NTDB_id=413281 FHE72_RS24425 WP_350448828.1 1287371..1287775(+) (recX) [Rossellomorea vietnamensis strain 151-6]
ATGGGTAAGATTACGAAAATAACGAAGCAAGTAAAGAACGAGGAGCGTTACAATTTATTTATAGATGGAAAATATTCTTT
CAGTGTCGATGAAGCGGTTCTTGCCAAGTTTCAGCTCAGAAAAGGGCTCGAGGTGGATGAGCTTGAGATTTCGGAGCTTC
AATATGAAGACGATGTTAAAAAGGCATTTAATAAAGCCATACAGTATCTGGCCTACCGGATGAGAACGGAAAAGGAAATC
CGTGATCACTTGCAGGAAGGGGACCCGGAGGAAGGGATCATCCAGGAAGTCATTCATAAATTAAATGAGATTAAATACAT
CAATGATTTAGAATTCGCCCACGCGTTTGTCGGGACCCAAATGAATACGGCTGATAAGGGGCCGACTTGGATCCGGGGGA
ATTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(86-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

55.469

95.522

0.53

Multiple sequence alignment