Detailed information NTG0412961

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: GTN31_RS07430
• Genome accession: NZ_CP047361
• Coordinates: 1437824..1440205 (-)
• Length: 793 a.a.
• NCBI ID: WP_164942349.1
• Uniprot ID: -
• Organism: Macrococcoides canis strain SD607
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1432824..1445205

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GTN31_RS07410 (GTN31_07400)	-	1433885..1434196 (-)	312	WP_099482913.1	DUF1292 domain-containing protein	-
GTN31_RS07415 (GTN31_07405)	ruvX	1434212..1434631 (-)	420	WP_086042803.1	Holliday junction resolvase RuvX	-
GTN31_RS07420 (GTN31_07410)	-	1434624..1434869 (-)	246	WP_226997688.1	IreB family regulatory phosphoprotein	-
GTN31_RS07425 (GTN31_07415)	alaS	1434949..1437573 (-)	2625	WP_164942348.1	alanine--tRNA ligase	-
GTN31_RS07430 (GTN31_07420)	recD2	1437824..1440205 (-)	2382	WP_164942349.1	ATP-dependent RecD-like DNA helicase	Machinery gene
GTN31_RS07435 (GTN31_07425)	-	1440208..1440867 (-)	660	WP_164942350.1	tetratricopeptide repeat protein	-
GTN31_RS07440 (GTN31_07430)	mnmA	1440967..1442082 (-)	1116	WP_164942351.1	tRNA 2-thiouridine(34) synthase MnmA	-
GTN31_RS07445 (GTN31_07435)	-	1442094..1443221 (-)	1128	WP_164942352.1	cysteine desulfurase family protein	-
GTN31_RS07450 (GTN31_07440)	-	1443394..1444389 (+)	996	WP_164942353.1	LLM class flavin-dependent oxidoreductase	-

Sequence

Protein

• Length: 793 a.a.
• Molecular weight: 89719.93 Da
• Isoelectric Point: 4.5223

>NTDB_id=412961 GTN31_RS07430 WP_164942349.1 1437824..1440205(-) (recD2) [Macrococcoides canis strain SD607]
MENMTLFEQSFVKGTITRILFYNNDNFYTVLKAEVIESNEDFDDDATITGYLPQIAEGDTYTFTGKIVTHPKYGKQLQAD
KFEKDMPQSRDGIIHYLSSDLFKGVGKKTARTIVEVLGEDALNIILDDKSSLDRVPKLSDEKKDLIFNTIHDNQAIEKIM
IRLNEFGFGPQLAMKIYQFYKDDTLKVINESPYQLVMDIEGIGFNKADELAGKLGIDNNHPERLKAALVFTIEQASNQNG
HTYIPDQVLLETSFNLLTKNGSQVDPDRLVIALTELTEEHKLVEHEKNIYIPSLFYSETKAVQILHRLLNHKNQVKQFEQ
SEVLLAIGELESLFEVSYAERQKDALVTAMNSKLMILTGGPGTGKTTVVRGIVNLYAELHGLSLDYDDYDGQDYPIVVAA
PTGRASKRLQESTGLEATTIHRLIGWTRENKPDDVLETEITAKLVIIDEMSMVDTWLMFQLMKAVPNDAQIIFVGDQDQL
PSVGPGQVFKDMIDAQIMPQIELNEVYRQQEGSSIVELAHQIKRNEPFDITKRYNDRSFIPCSSSQIPEVIEKIVRSAVN
KGYDMRDIQVLAPIYRGPAGIRALNKVLQEILNPSDENKRELQFGDVYFRTGDKVLQLVNRPEDNVFNGDIGEVTGIFMA
AENALNKDVVIVDYDGSEVTYTKADLMEVTHAYCCSIHKSQGSEFPIVIMPVVNQYFRMLQKNILYTGLTRAKQSLIFCG
DVQAFNEGIKRIGNARFISFYQFLIDYFKTDEADDNAGDNVLPFDVGEMTEDNMHLVDPMINMEGITPYDFIS

Nucleotide

• Length: 2382 bp

>NTDB_id=412961 GTN31_RS07430 WP_164942349.1 1437824..1440205(-) (recD2) [Macrococcoides canis strain SD607]
TTGGAAAATATGACTTTGTTTGAGCAATCCTTTGTAAAAGGGACAATAACGAGAATATTATTTTATAACAATGATAATTT
CTATACTGTGCTGAAGGCAGAAGTGATTGAATCAAACGAAGATTTCGATGATGATGCTACGATTACAGGTTACCTTCCGC
AAATTGCAGAAGGTGATACATATACGTTCACAGGTAAGATTGTAACCCATCCGAAGTACGGAAAGCAGTTACAGGCAGAT
AAGTTTGAGAAGGATATGCCGCAGTCTCGTGACGGTATTATTCATTATTTATCGAGTGATCTGTTTAAAGGGGTCGGTAA
GAAAACAGCGAGAACAATCGTAGAAGTCCTGGGTGAAGATGCGCTAAATATTATTCTCGATGATAAAAGTAGTCTTGACA
GAGTTCCGAAGTTATCAGACGAGAAAAAAGATCTAATTTTTAATACGATACACGACAATCAGGCAATCGAGAAGATTATG
ATTCGTCTGAATGAATTTGGATTCGGTCCACAGCTTGCAATGAAGATCTATCAGTTCTATAAGGATGATACGCTGAAGGT
GATTAATGAATCCCCATATCAACTCGTGATGGATATTGAAGGTATCGGATTTAATAAGGCGGATGAACTGGCAGGGAAAC
TCGGTATCGATAACAATCACCCCGAACGTCTGAAAGCAGCGCTCGTGTTTACGATAGAGCAAGCCTCTAATCAGAATGGT
CATACATATATTCCGGACCAGGTGTTACTTGAAACGAGCTTCAATCTACTGACGAAAAATGGCAGTCAAGTCGATCCAGA
CCGTCTCGTTATCGCACTCACTGAACTGACAGAGGAACATAAGCTCGTTGAACATGAGAAGAACATCTATATCCCGAGTC
TATTCTACTCTGAAACGAAAGCTGTACAAATATTGCATCGATTATTGAATCATAAGAACCAGGTGAAACAGTTCGAACAG
TCTGAAGTATTGCTGGCAATCGGGGAACTGGAGTCACTGTTCGAAGTGAGTTATGCAGAACGACAGAAAGATGCGCTTGT
AACGGCGATGAACAGTAAACTGATGATCTTAACGGGGGGACCAGGTACAGGAAAGACGACGGTTGTGCGCGGTATTGTGA
ATTTATATGCTGAACTGCATGGGTTAAGTCTAGATTATGATGACTATGATGGGCAGGACTATCCGATTGTTGTCGCAGCA
CCAACTGGTCGTGCATCGAAACGTCTTCAGGAGTCTACAGGACTTGAAGCGACAACAATACACAGGTTAATTGGCTGGAC
GAGAGAGAATAAACCCGATGATGTACTGGAAACGGAAATTACAGCGAAGCTTGTCATTATCGATGAAATGTCGATGGTTG
ATACGTGGCTCATGTTTCAGTTGATGAAAGCTGTGCCGAATGATGCACAGATTATCTTTGTCGGTGACCAGGACCAGTTG
CCATCCGTTGGACCAGGGCAAGTGTTCAAAGACATGATAGATGCACAAATTATGCCGCAGATTGAGCTGAATGAAGTGTA
CAGGCAGCAGGAAGGTTCATCAATCGTTGAACTTGCGCACCAAATTAAGCGTAATGAACCATTTGATATTACGAAACGTT
ATAATGACAGAAGCTTTATACCGTGCTCAAGCAGTCAAATACCAGAAGTGATCGAGAAGATCGTGCGCAGTGCTGTGAAT
AAAGGGTATGACATGCGTGATATACAAGTACTCGCACCGATATATAGAGGACCAGCGGGTATACGTGCGCTGAACAAAGT
GCTGCAGGAAATATTGAATCCAAGTGATGAAAACAAGCGTGAACTACAGTTTGGTGATGTTTATTTCAGGACAGGGGACA
AAGTGCTGCAGCTTGTCAATCGACCGGAAGACAATGTGTTTAACGGCGATATTGGTGAAGTGACAGGTATCTTTATGGCG
GCAGAGAACGCGCTGAATAAAGATGTTGTCATTGTGGATTATGATGGGAGTGAAGTAACGTATACGAAAGCTGATTTAAT
GGAAGTTACACATGCCTACTGCTGCTCCATTCATAAATCACAAGGTTCGGAATTTCCGATTGTCATTATGCCGGTTGTCA
ATCAATACTTCAGAATGCTGCAGAAGAATATACTCTATACCGGATTAACACGCGCGAAACAGTCACTTATTTTCTGTGGA
GATGTACAGGCGTTTAATGAAGGAATAAAGCGAATCGGTAACGCAAGGTTTATAAGCTTCTATCAGTTTCTTATCGATTA
TTTTAAGACAGATGAAGCAGATGATAATGCAGGTGATAACGTATTACCTTTCGACGTTGGTGAGATGACTGAAGACAATA
TGCATCTCGTTGATCCAATGATCAACATGGAAGGTATAACACCCTATGATTTTATAAGTTGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (338-543)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (671-718)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (584-653)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	51.81	100	0.523