Detailed information NTG0412716

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: H6S61_RS07125
• Genome accession: NZ_CP060047
• Coordinates: 1406168..1408990 (+)
• Length: 940 a.a.
• NCBI ID: WP_058667258.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain 2497-87
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1401168..1413990

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H6S61_RS07105 (H6S61_07105)	csrD	1401331..1403328 (-)	1998	WP_045614552.1	RNase E specificity factor CsrD	-
H6S61_RS07110 (H6S61_07110)	ssb	1403481..1404020 (-)	540	WP_011079389.1	single-stranded DNA-binding protein	Machinery gene
H6S61_RS07115 (H6S61_07115)	qstR	1404320..1404967 (+)	648	WP_017420064.1	response regulator transcription factor	Regulator
H6S61_RS07120 (H6S61_07120)	galU	1405153..1406025 (+)	873	WP_017420065.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
H6S61_RS07125 (H6S61_07125)	uvrA	1406168..1408990 (+)	2823	WP_058667258.1	excinuclease ABC subunit UvrA	Machinery gene
H6S61_RS07130 (H6S61_07130)	-	1409057..1410820 (+)	1764	WP_185892007.1	PglL family O-oligosaccharyltransferase	-
H6S61_RS07135 (H6S61_07135)	-	1410884..1412005 (-)	1122	WP_017789786.1	alanine--glyoxylate aminotransferase family protein	-
H6S61_RS07140 (H6S61_07140)	lysC	1412520..1413869 (+)	1350	WP_185892010.1	lysine-sensitive aspartokinase 3	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103931.30 Da
• Isoelectric Point: 6.5098

>NTDB_id=412716 H6S61_RS07125 WP_058667258.1 1406168..1408990(+) (uvrA) [Vibrio vulnificus strain 2497-87]
MDKIEVRGARTHNLKNVNLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPEHQVPLAAQTISQMVDKVLELPEGAKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLTDPPTLELHKKHTIEVVVDRFKVRSDLQQRLAESFETALELSGGIAVIAPMEGD
GEESVFSANFACPHCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPDRVIQDANLSLAQGAIRGWDQKNYYYFQML
TSLAEHYDFDLHVPFNSLSKRIQEVILKGSGRTEVEFKYINDRGDIRLKRHPFEGILNTLERRYRDTESNSVREELVKYI
STKPCASCGGTRLRLEARNVFINGTTLPQIVELSIADALTFFATLKLDGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGQVVAEGTMAEILANPDSLTGQYLSGAKQIIVPTQRTPRDKNKTVELIGASGNNLKDVNLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAQPAPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVHYKGKSIDEVLEMTVEDARDFFD
PVPVIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVAQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=412716 H6S61_RS07125 WP_058667258.1 1406168..1408990(+) (uvrA) [Vibrio vulnificus strain 2497-87]
ATGGACAAGATAGAAGTTCGCGGAGCACGTACCCATAATCTCAAAAATGTTAATCTCACTATCCCACGAGATAAGTTGAT
CGTCATTACTGGCTTATCGGGTTCAGGGAAATCTTCTTTGGCCTTTGATACCCTTTACGCTGAAGGTCAACGACGTTATG
TAGAATCCCTGTCAGCCTACGCTCGCCAGTTTCTCTCTTTGATGGAAAAGCCCGATGTTGACCACATTGAAGGCCTCTCG
CCAGCAATTTCTATCGAGCAGAAATCCACCTCACACAACCCGCGTTCAACCGTAGGGACCATCACAGAAGTGTATGACTA
CCTTCGCCTACTGTATGCCCGCGTTGGTGAGCCTCGTTGTCCTGAACATCAAGTCCCTTTAGCCGCTCAAACCATTAGCC
AAATGGTCGACAAAGTTCTGGAGCTGCCTGAAGGTGCCAAAATGATGTTGCTCGCCCCCATCGTAAAAGAGCGCAAAGGC
GAACACGTTAAAACATTAGAGAACCTTGCTGCTCAAGGTTTTATCCGTGCACGTATTGACGGAGAGACCTGTGACCTCAC
CGATCCACCAACGCTAGAGTTACACAAAAAGCACACCATTGAAGTGGTGGTTGACCGCTTTAAAGTGCGTAGCGATTTAC
AACAAAGACTCGCAGAGTCCTTTGAAACGGCACTGGAACTCTCAGGCGGCATCGCTGTGATTGCCCCTATGGAGGGTGAC
GGTGAAGAGAGCGTTTTTTCCGCCAATTTTGCGTGTCCCCACTGTGGTTATAGTATGCAAGAGCTTGAGCCACGTTTGTT
CTCGTTCAATAACCCAGCCGGTGCGTGTGGTACTTGTGATGGCCTCGGGGTACAACAATATTTTGATCCTGACCGAGTGA
TTCAAGATGCCAATTTAAGTCTTGCGCAAGGGGCGATTCGTGGTTGGGATCAGAAAAACTATTACTATTTCCAAATGCTC
ACATCGCTGGCTGAGCATTACGATTTCGATTTACATGTCCCTTTTAATTCGCTTTCAAAACGCATCCAAGAAGTGATCTT
AAAAGGCTCAGGGCGCACTGAAGTCGAATTTAAATACATCAATGATCGAGGCGACATTCGTCTAAAACGTCATCCATTTG
AAGGCATTCTCAATACACTCGAACGCCGTTATCGCGACACAGAATCTAACTCGGTACGAGAGGAGTTGGTAAAATATATC
TCCACCAAACCTTGCGCCAGTTGTGGCGGAACACGTCTGCGCCTAGAAGCTCGCAATGTGTTTATTAATGGCACGACATT
GCCGCAAATCGTCGAGTTGAGTATCGCTGATGCATTGACCTTTTTCGCCACCTTAAAACTTGACGGTCAGCGAGCTCAAA
TTGCTGAGAAGGTCATGAAAGAGATCAACGATCGACTGCAGTTTTTAGTCAATGTTGGCCTCAATTATTTGAACTTGTCT
CGCAGCGCTGAAACCTTGTCTGGTGGCGAAGCGCAGCGTATTCGTCTGGCTAGTCAGATCGGTGCTGGTTTGGTCGGCGT
GATGTACGTGCTCGATGAGCCATCAATAGGCCTTCACCAGCGTGACAATGAGCGCTTACTCAAAACACTGACGCACTTAC
GCGATCTCGGCAATACCGTATTAGTCGTAGAGCATGATGAAGATGCGATTCGTTGTGCCGACCATGTGATTGACATTGGC
CCTGGTGCTGGCGTACATGGTGGCCAAGTGGTTGCCGAAGGAACAATGGCCGAGATTCTCGCCAATCCAGATTCCTTGAC
CGGACAATACTTAAGCGGTGCCAAGCAGATTATTGTGCCGACCCAACGCACACCAAGAGATAAGAACAAAACGGTTGAAC
TCATTGGAGCCAGTGGCAACAACCTTAAAGACGTCAATCTTTCAGTGCCTGTCGGGCTATTCAGTTGTATCACCGGGGTT
TCTGGTTCAGGTAAATCAACACTGATTAACGACACCTTCTTCAAAATTGCGCATACTCAACTCAATGGGGCAACCACTGC
TCAACCAGCGCCTTATAAGTCTATTAAAGGCTTAGAGCATTTTGATAAGGTCATCGATATCGACCAGAGCCCGATAGGTC
GCACACCGCGTTCGAATCCAGCGACCTATACGGGGATTTTCACTCCGATTAGAGAGTTGTTCTCCGGCACCCAAGAGTCT
CGTTCACGTGGCTATAAACCTGGGCGTTTCAGCTTTAACGTTCGTGGTGGCCGCTGTGAAGCTTGCCAAGGTGATGGTGT
TATCAAGGTTGAAATGCATTTCCTACCCGATGTGTACGTGCCTTGTGATGTGTGTAAGGGCAAGCGCTACAACCGAGAAA
CGTTAGAAGTTCACTATAAAGGGAAGAGCATTGATGAAGTTCTGGAAATGACGGTGGAAGATGCTCGAGACTTTTTCGAC
CCAGTTCCCGTTATTGCGCGCAAGTTGCAAACCTTAATGGATGTTGGTCTTTCTTATATCCGTTTAGGTCAAGCGGCCAC
CACCCTCTCTGGCGGTGAAGCACAACGGGTGAAACTGGCCCGTGAGTTGTCCAAACGCGATACGGGAAAAACCCTTTATA
TTTTGGATGAACCAACGACGGGCCTACACTTCCACGATATCCAGCAACTTTTGACCGTATTGCATCGCTTGCGCGATCAT
GGCAACACCGTTGTCGTGATTGAGCATAATTTAGATGTGATCAAAACGGCCGACTGGATCATCGACTTAGGTCCAGAAGG
CGGCCAAGGTGGAGGGGAAATCATTGCTCAAGGAACACCTGAAGATGTGGCGCAGATCGAAGGTTCGCATACCGCACGCT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-236)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-396)

• ABC transporter (ABC_tran) (622-859)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	58.068	100	0.582
uvrA	Streptococcus pneumoniae TIGR4	58.068	100	0.582
uvrA	Streptococcus pneumoniae D39	58.068	100	0.582