Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | GSY53_RS08045 | Genome accession | NZ_CP047325 |
| Coordinates | 1558252..1558542 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain GOT9 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1553252..1563542
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GSY53_RS08005 (GSY53_08005) | darA | 1553275..1553604 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| GSY53_RS08010 (GSY53_08010) | yaaR | 1553617..1554057 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| GSY53_RS08015 (GSY53_08015) | holB | 1554069..1555058 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| GSY53_RS08020 (GSY53_08020) | ricT | 1555061..1555888 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| GSY53_RS08025 (GSY53_08025) | yabA | 1555903..1556262 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| GSY53_RS08030 (GSY53_08030) | trmNF | 1556321..1557064 (+) | 744 | WP_003226765.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| GSY53_RS08035 (GSY53_08035) | yazA | 1557051..1557350 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| GSY53_RS08040 (GSY53_08040) | rsmI | 1557325..1558203 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| GSY53_RS08045 (GSY53_08045) | abrB | 1558252..1558542 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| GSY53_RS08050 (GSY53_08050) | metG | 1559037..1561031 (+) | 1995 | WP_003226758.1 | methionine--tRNA ligase | - |
| GSY53_RS08055 (GSY53_08055) | dayD | 1561110..1561877 (+) | 768 | WP_003226756.1 | TatD family hydrolase | - |
| GSY53_RS08060 (GSY53_08060) | yabE | 1562033..1563346 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=412702 GSY53_RS08045 WP_003226760.1 1558252..1558542(-) (abrB) [Bacillus subtilis strain GOT9]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=412702 GSY53_RS08045 WP_003226760.1 1558252..1558542(-) (abrB) [Bacillus subtilis strain GOT9]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |