Detailed information NTG0412695

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: GSY53_RS05925
• Genome accession: NZ_CP047325
• Coordinates: 1144730..1145875 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain GOT9
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1139730..1150875

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GSY53_RS05900 (GSY53_05900)	albF	1139746..1141026 (+)	1281	WP_003242974.1	pitrilysin family protein	-
GSY53_RS05905 (GSY53_05905)	albG	1141023..1141724 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
GSY53_RS05910 (GSY53_05910)	ywhL	1141730..1143106 (-)	1377	WP_003244415.1	YncE family protein	-
GSY53_RS05915 (GSY53_05915)	ywhK	1143145..1144500 (-)	1356	WP_003227552.1	YncE family protein	-
GSY53_RS21545 (GSY53_05920)	-	1144497..1144727 (-)	231	WP_009968328.1	hypothetical protein	-
GSY53_RS05925 (GSY53_05925)	rapF	1144730..1145875 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
GSY53_RS05930 (GSY53_05930)	phrF	1145859..1145978 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
GSY53_RS05935 (GSY53_05935)	ywhH	1146077..1146550 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
GSY53_RS05940 (GSY53_05940)	speB	1146582..1147454 (-)	873	WP_003227545.1	agmatinase	-
GSY53_RS05945 (GSY53_05945)	speE	1147515..1148345 (-)	831	WP_003227543.1	spermidine synthase	-
GSY53_RS05950 (GSY53_05950)	pbpG	1148547..1150622 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=412695 GSY53_RS05925 WP_003227549.1 1144730..1145875(+) (rapF) [Bacillus subtilis strain GOT9]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=412695 GSY53_RS05925 WP_003227549.1 1144730..1145875(+) (rapF) [Bacillus subtilis strain GOT9]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572