Detailed information NTG0041251

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ECOK1_RS22740
• Genome accession: NC_017628
• Coordinates: 4512551..4513576 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli IHE3034
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4507551..4518576

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ECOK1_RS22710 (ECOK1_4396)	zapB	4507635..4507880 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ECOK1_RS22715 (ECOK1_4397)	rraA	4507965..4508450 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ECOK1_RS22720 (ECOK1_4398)	menA	4508543..4509469 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ECOK1_RS22725 (ECOK1_4399)	hslU	4509536..4510867 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ECOK1_RS22730 (ECOK1_4400)	hslV	4510877..4511407 (-)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
ECOK1_RS22735 (ECOK1_4401)	ftsN	4511500..4512459 (-)	960	WP_000068834.1	cell division protein FtsN	-
ECOK1_RS22740 (ECOK1_4402)	cytR	4512551..4513576 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ECOK1_RS22745 (ECOK1_4403)	priA	4513732..4515930 (-)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
ECOK1_RS22750 (ECOK1_4404)	rpmE	4516133..4516345 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ECOK1_RS22755 (ECOK1_4405)	yiiX	4516406..4517014 (-)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
ECOK1_RS22760 (ECOK1_4406)	metJ	4517074..4517391 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=41251 ECOK1_RS22740 WP_000644904.1 4512551..4513576(-) (cytR) [Escherichia coli IHE3034]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=41251 ECOK1_RS22740 WP_000644904.1 4512551..4513576(-) (cytR) [Escherichia coli IHE3034]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628