Detailed information NTG0412307

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: GTF72_RS17230
• Genome accession: NZ_CP047296
• Coordinates: 683407..684501 (-)
• Length: 364 a.a.
• NCBI ID: WP_000823678.1
• Uniprot ID: Q9KLK6
• Organism: Vibrio cholerae C6706
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 678407..689501

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GTF72_RS17210 (GTF72_17255)	-	678747..679145 (+)	399	WP_000831416.1	YgiW/YdeI family stress tolerance OB fold protein	-
GTF72_RS17215 (GTF72_17260)	-	679397..679915 (+)	519	WP_000914961.1	hypothetical protein	-
GTF72_RS17220 (GTF72_17265)	-	680159..680824 (+)	666	WP_000268204.1	flagellar brake protein	-
GTF72_RS17225 (GTF72_17270)	luxQ	680816..683389 (-)	2574	WP_001026306.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
GTF72_RS17230 (GTF72_17275)	luxP	683407..684501 (-)	1095	WP_000823678.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
GTF72_RS17235 (GTF72_17280)	traF	684713..685873 (-)	1161	WP_001025860.1	conjugal transfer protein TraF	-
GTF72_RS17240 (GTF72_17285)	-	685975..686280 (-)	306	WP_000429067.1	GIY-YIG nuclease family protein	-
GTF72_RS17245 (GTF72_17290)	-	686297..686947 (-)	651	WP_001025631.1	YceH family protein	-
GTF72_RS17250 (GTF72_17295)	-	686989..687186 (-)	198	WP_001246071.1	hypothetical protein	-
GTF72_RS17255 (GTF72_17300)	-	687374..687694 (+)	321	WP_001089529.1	DUF496 family protein	-
GTF72_RS18980	-	687694..687843 (+)	150	WP_000611732.1	hypothetical protein	-
GTF72_RS17260 (GTF72_17305)	-	688107..688358 (+)	252	WP_001882582.1	YgjV family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41196.81 Da
• Isoelectric Point: 6.3129

>NTDB_id=412307 GTF72_RS17230 WP_000823678.1 683407..684501(-) (luxP) [Vibrio cholerae C6706]
MKRKLISPLFLIAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSALTVAQEQPVIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEYGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKSVPLVYSGDFEVVTKQDSAARIAELKARAFRYSDR

Nucleotide

• Length: 1095 bp

>NTDB_id=412307 GTF72_RS17230 WP_000823678.1 683407..684501(-) (luxP) [Vibrio cholerae C6706]
ATGAAAAGAAAGCTAATATCTCCGCTGTTTCTGATAGCAGCACTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGTGCGTTGACGGTGGCGCAAGAACAACCCGTCATTATTTCGGTGGTCTATCCCGGACAGCAAATTTCTGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGATGCTTTGGGGATTCGCTATCAAATCAATCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCCTTGATGGAAGCGCTGAAAAATAAGAGCGACTATCTGATTTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAGCATGTGCTGCACTCCTCCGAAACGAAACTGATTTTGCAAAACATC
ACGACGCCAGTCAAAGATTGGCAAGGCAAGCAGCCCATGATGTACATCGGTTTTGATCATGAGTACGGTGCGCAATTATT
GGCGCAATATTACCAAGCACATGCTCCGAAAAAGCCGTACTCAGTACTTTATTTTTCCGAGGGGTATATCAGTGAAGCGC
GGGGAGACACCTTCATTCAAGATATGAACGCGGTGCACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACCCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
CGCTTTGGGAGCTGCGCAGGCACTGAAAGAGCTGAATCGACAAGATATTCTGGTCAATGGTTGGGGAGGCGGTTCGGCAG
AGCTTGAAGCGCTTGCCAAAGGAGAATTGGATGTCACTGTGATGCGTATGAATGACGATACGGGTGTGGCGATGGCTGAA
GCGATTAAATGGGATTTGGAAGGGAAATCCGTACCTTTGGTCTATTCAGGCGATTTTGAAGTGGTCACCAAACAAGATTC
AGCAGCACGTATTGCAGAACTGAAAGCTCGGGCTTTCCGTTATTCGGATCGTTAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-323)

3D structure

• AlphaFold DB: Q9KLK6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	100	100	1