Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | H5022_RS02075 | Genome accession | NZ_CP060004 |
| Coordinates | 446296..446661 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain WK172 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 441296..451661
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5022_RS02045 (H5022_02040) | pyrR | 441918..442430 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| H5022_RS02050 (H5022_02045) | ruvX | 442542..442976 (-) | 435 | WP_003121753.1 | Holliday junction resolvase RuvX | - |
| H5022_RS02055 (H5022_02050) | - | 442976..443545 (-) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| H5022_RS02060 (H5022_02055) | - | 443594..444487 (-) | 894 | WP_003162015.1 | energy transducer TonB | - |
| H5022_RS02065 (H5022_02060) | gshB | 444634..445587 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| H5022_RS02070 (H5022_02065) | pilG | 445842..446249 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| H5022_RS02075 (H5022_02070) | pilH | 446296..446661 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| H5022_RS02080 (H5022_02075) | - | 446712..447248 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| H5022_RS02085 (H5022_02080) | pilJ | 447333..449381 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| H5022_RS02090 (H5022_02085) | pilK | 449442..450317 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=412269 H5022_RS02075 WP_003084587.1 446296..446661(+) (pilH) [Pseudomonas aeruginosa strain WK172]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=412269 H5022_RS02075 WP_003084587.1 446296..446661(+) (pilH) [Pseudomonas aeruginosa strain WK172]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |