Detailed information NTG0041220

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: ECOK1_RS17460
• Genome accession: NC_017628
• Coordinates: 3448963..3450168 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161829.1
• Uniprot ID: A0A0H2Z2G4
• Organism: Escherichia coli IHE3034
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3443963..3455168

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ECOK1_RS17445 (ECOK1_3361)	-	3444478..3446154 (+)	1677	WP_001331697.1	polysaccharide biosynthesis/export family protein	-
ECOK1_RS17450 (ECOK1_3362)	kdsB	3446164..3446904 (+)	741	WP_000030755.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ECOK1_RS17455 (ECOK1_3363)	-	3446901..3448928 (+)	2028	WP_000579525.1	capsular polysaccharide biosynthesis protein	-
ECOK1_RS17460 (ECOK1_3364)	kpsS	3448963..3450168 (+)	1206	WP_001161829.1	capsular biosynthesis protein	Regulator
ECOK1_RS17465 (ECOK1_3365)	-	3450318..3451547 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
ECOK1_RS17470 (ECOK1_3366)	-	3451537..3452685 (-)	1149	WP_000197085.1	DUF6716 putative glycosyltransferase	-
ECOK1_RS17475 (ECOK1_3367)	neuC	3452678..3453853 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
ECOK1_RS17480 (ECOK1_3368)	-	3453850..3455106 (-)	1257	WP_001259305.1	GDSL-type esterase/lipase family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47976.30 Da
• Isoelectric Point: 10.0024

>NTDB_id=41220 ECOK1_RS17460 WP_001161829.1 3448963..3450168(+) (kpsS) [Escherichia coli IHE3034]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEDGVNAYSSLPRDPDFYRKLPDMPTPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLSERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=41220 ECOK1_RS17460 WP_001161829.1 3448963..3450168(+) (kpsS) [Escherichia coli IHE3034]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGCCGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GTCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTTCCCGGATGGTTACGGGATCTCCATCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGCTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGACGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTACGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGTATGAAGCACGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAACGAGTTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTATATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTAAGTAAGG
AATATGGCTTAAGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

3D structure

• AlphaFold DB: A0A0H2Z2G4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	40.103	97.007	0.389