Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | GRI05_RS03430 | Genome accession | NZ_CP047248 |
| Coordinates | 701856..703658 (+) | Length | 600 a.a. |
| NCBI ID | WP_012027200.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain LSM178 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 696856..708658
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GRI05_RS03415 (GRI05_03500) | - | 697868..698461 (-) | 594 | WP_012027204.1 | DUF1361 domain-containing protein | - |
| GRI05_RS03420 (GRI05_03505) | metG | 698617..700620 (+) | 2004 | WP_012775442.1 | methionine--tRNA ligase | - |
| GRI05_RS03425 (GRI05_03510) | coiA | 700684..701625 (+) | 942 | WP_012027201.1 | competence protein CoiA | Machinery gene |
| GRI05_RS03430 (GRI05_03515) | pepF | 701856..703658 (+) | 1803 | WP_012027200.1 | oligoendopeptidase F | Regulator |
| GRI05_RS03435 (GRI05_03520) | - | 703660..704100 (+) | 441 | WP_012775191.1 | hypothetical protein | - |
| GRI05_RS03440 (GRI05_03525) | - | 704116..704664 (+) | 549 | WP_002938103.1 | DUF6630 family protein | - |
| GRI05_RS03445 (GRI05_03530) | - | 704739..705458 (+) | 720 | WP_009910106.1 | O-methyltransferase | - |
| GRI05_RS03450 (GRI05_03535) | prsA | 705519..706520 (+) | 1002 | WP_002938100.1 | peptidylprolyl isomerase PrsA | - |
| GRI05_RS03455 (GRI05_03540) | - | 706788..707273 (+) | 486 | WP_012775190.1 | LURP-one-related/scramblase family protein | - |
Sequence
Protein
Download Length: 600 a.a. Molecular weight: 69246.49 Da Isoelectric Point: 4.5800
>NTDB_id=411859 GRI05_RS03430 WP_012027200.1 701856..703658(+) (pepF) [Streptococcus suis strain LSM178]
MSKQRYEIEEKYQWDLTTIFPTDEAWEAELADLQAETEKTKEFAGHLLDSAKSLLEISETQLSLMRRIEKLYVYASMKND
QDTREGKYQEFQAKAMGLYAVFSQAFAFYEPEFMGITEEKLEAFKVEEPALVQYSHQFEKLLAAKDHVLSQEVEEVLAAT
SEIFESPAETFSVLDNASLRFPEITDEDGHLVPLSHGNYIHFMESKNRDVRQEAYEAMYGTYEQFQHTYAKTLQSNVKVN
NLKARLRKYDSARHASLAANFIPESVYDTLVAAVNKHLPLLHRYINLRKKLLGIDDLKMYDMYTPLSDFSTKISYEDALK
KCQETLEIFGEDYSAIVKEAFENRWIDVHVNEGKRSGAYSGGAYDTNAFMLLNWQDNLDNMYTLIHETGHSLHSMLTRKT
QPYVYGHYSLFLAEIASTTNENLLTEKLLAEVEDDKERFAILNHYLDGFRGTVFRQTQFAEFEQAIYKADQEGQVLTADF
LNELYGQTNEKYYGLSAEENPEIQFEWARIPHFYYNFYVYQYATGFAAASALANKIVNGSPEDKENYLNYLKAGSSDYSL
NVIAKAGVDMTKEDYLNDAFKVFEARLEELEALVEKGVHL
MSKQRYEIEEKYQWDLTTIFPTDEAWEAELADLQAETEKTKEFAGHLLDSAKSLLEISETQLSLMRRIEKLYVYASMKND
QDTREGKYQEFQAKAMGLYAVFSQAFAFYEPEFMGITEEKLEAFKVEEPALVQYSHQFEKLLAAKDHVLSQEVEEVLAAT
SEIFESPAETFSVLDNASLRFPEITDEDGHLVPLSHGNYIHFMESKNRDVRQEAYEAMYGTYEQFQHTYAKTLQSNVKVN
NLKARLRKYDSARHASLAANFIPESVYDTLVAAVNKHLPLLHRYINLRKKLLGIDDLKMYDMYTPLSDFSTKISYEDALK
KCQETLEIFGEDYSAIVKEAFENRWIDVHVNEGKRSGAYSGGAYDTNAFMLLNWQDNLDNMYTLIHETGHSLHSMLTRKT
QPYVYGHYSLFLAEIASTTNENLLTEKLLAEVEDDKERFAILNHYLDGFRGTVFRQTQFAEFEQAIYKADQEGQVLTADF
LNELYGQTNEKYYGLSAEENPEIQFEWARIPHFYYNFYVYQYATGFAAASALANKIVNGSPEDKENYLNYLKAGSSDYSL
NVIAKAGVDMTKEDYLNDAFKVFEARLEELEALVEKGVHL
Nucleotide
Download Length: 1803 bp
>NTDB_id=411859 GRI05_RS03430 WP_012027200.1 701856..703658(+) (pepF) [Streptococcus suis strain LSM178]
ATGTCTAAACAACGTTACGAAATTGAAGAAAAATACCAGTGGGATTTAACCACTATTTTCCCAACCGATGAAGCCTGGGA
AGCAGAACTTGCAGATTTACAAGCTGAAACTGAAAAAACAAAAGAATTTGCAGGTCATTTACTGGACTCAGCTAAAAGTC
TCTTAGAAATTAGCGAAACGCAACTTAGTCTTATGCGTCGCATTGAAAAACTCTATGTCTATGCGTCTATGAAGAACGAC
CAAGATACTCGCGAAGGAAAATATCAGGAATTTCAAGCTAAGGCCATGGGCTTGTATGCTGTCTTTTCACAGGCTTTTGC
CTTCTATGAGCCTGAATTTATGGGCATTACTGAAGAGAAATTGGAAGCCTTTAAAGTAGAAGAGCCGGCTCTTGTTCAGT
ACAGCCATCAATTTGAAAAACTTTTAGCAGCTAAGGACCATGTCTTGTCACAAGAGGTGGAAGAAGTATTGGCGGCGACC
AGCGAAATTTTCGAATCACCAGCTGAAACCTTCTCAGTCTTGGACAATGCCAGCCTGCGTTTCCCAGAAATCACAGATGA
AGACGGTCACTTGGTGCCACTTTCACACGGAAACTACATCCACTTTATGGAGTCTAAAAACCGTGATGTCCGCCAAGAAG
CCTATGAAGCTATGTACGGTACTTATGAGCAGTTCCAGCATACATACGCTAAGACCCTTCAGTCTAATGTCAAGGTCAAT
AACTTGAAAGCTCGTTTGCGGAAGTACGATTCAGCCCGTCACGCATCACTTGCAGCTAATTTCATTCCAGAATCTGTTTA
CGATACATTAGTGGCGGCAGTCAACAAGCACCTTCCGCTCTTGCATCGTTACATCAATTTGCGTAAGAAGCTCCTGGGGA
TTGATGACTTGAAGATGTACGATATGTACACACCATTGTCAGATTTCAGCACCAAGATTTCTTATGAAGATGCTCTTAAA
AAATGTCAAGAAACCTTGGAAATCTTCGGCGAGGATTATTCGGCTATTGTGAAGGAAGCCTTCGAAAACCGCTGGATTGA
TGTCCATGTTAATGAAGGAAAACGCTCAGGAGCATACTCAGGAGGTGCCTACGACACCAACGCCTTCATGCTTCTCAACT
GGCAGGATAACTTGGATAACATGTACACCCTTATCCATGAAACAGGACATTCTCTTCATTCCATGTTGACTCGTAAGACT
CAACCCTATGTCTATGGCCATTATTCACTTTTCTTGGCTGAAATTGCTTCAACTACCAACGAAAACCTTCTGACTGAAAA
ACTCTTGGCAGAAGTAGAAGATGACAAGGAACGCTTTGCTATTCTAAATCATTACCTAGATGGTTTCCGTGGTACAGTCT
TCCGCCAGACCCAATTTGCCGAGTTTGAACAAGCTATCTATAAGGCAGACCAGGAAGGTCAGGTCTTGACGGCTGATTTC
CTCAATGAATTGTACGGTCAGACAAACGAGAAATATTACGGACTTTCTGCCGAAGAAAATCCAGAAATCCAGTTTGAGTG
GGCTCGTATTCCACACTTCTATTACAATTTCTATGTCTATCAGTATGCGACAGGTTTCGCAGCAGCATCAGCTCTAGCAA
ACAAGATTGTCAATGGTAGTCCAGAAGACAAAGAAAACTATCTCAACTACTTGAAGGCTGGTAGCTCAGATTATTCCCTC
AATGTCATTGCCAAAGCAGGTGTAGACATGACCAAGGAAGATTACCTCAATGATGCCTTCAAGGTATTTGAAGCCCGTTT
GGAAGAATTAGAAGCTCTCGTTGAGAAAGGTGTGCACCTCTAA
ATGTCTAAACAACGTTACGAAATTGAAGAAAAATACCAGTGGGATTTAACCACTATTTTCCCAACCGATGAAGCCTGGGA
AGCAGAACTTGCAGATTTACAAGCTGAAACTGAAAAAACAAAAGAATTTGCAGGTCATTTACTGGACTCAGCTAAAAGTC
TCTTAGAAATTAGCGAAACGCAACTTAGTCTTATGCGTCGCATTGAAAAACTCTATGTCTATGCGTCTATGAAGAACGAC
CAAGATACTCGCGAAGGAAAATATCAGGAATTTCAAGCTAAGGCCATGGGCTTGTATGCTGTCTTTTCACAGGCTTTTGC
CTTCTATGAGCCTGAATTTATGGGCATTACTGAAGAGAAATTGGAAGCCTTTAAAGTAGAAGAGCCGGCTCTTGTTCAGT
ACAGCCATCAATTTGAAAAACTTTTAGCAGCTAAGGACCATGTCTTGTCACAAGAGGTGGAAGAAGTATTGGCGGCGACC
AGCGAAATTTTCGAATCACCAGCTGAAACCTTCTCAGTCTTGGACAATGCCAGCCTGCGTTTCCCAGAAATCACAGATGA
AGACGGTCACTTGGTGCCACTTTCACACGGAAACTACATCCACTTTATGGAGTCTAAAAACCGTGATGTCCGCCAAGAAG
CCTATGAAGCTATGTACGGTACTTATGAGCAGTTCCAGCATACATACGCTAAGACCCTTCAGTCTAATGTCAAGGTCAAT
AACTTGAAAGCTCGTTTGCGGAAGTACGATTCAGCCCGTCACGCATCACTTGCAGCTAATTTCATTCCAGAATCTGTTTA
CGATACATTAGTGGCGGCAGTCAACAAGCACCTTCCGCTCTTGCATCGTTACATCAATTTGCGTAAGAAGCTCCTGGGGA
TTGATGACTTGAAGATGTACGATATGTACACACCATTGTCAGATTTCAGCACCAAGATTTCTTATGAAGATGCTCTTAAA
AAATGTCAAGAAACCTTGGAAATCTTCGGCGAGGATTATTCGGCTATTGTGAAGGAAGCCTTCGAAAACCGCTGGATTGA
TGTCCATGTTAATGAAGGAAAACGCTCAGGAGCATACTCAGGAGGTGCCTACGACACCAACGCCTTCATGCTTCTCAACT
GGCAGGATAACTTGGATAACATGTACACCCTTATCCATGAAACAGGACATTCTCTTCATTCCATGTTGACTCGTAAGACT
CAACCCTATGTCTATGGCCATTATTCACTTTTCTTGGCTGAAATTGCTTCAACTACCAACGAAAACCTTCTGACTGAAAA
ACTCTTGGCAGAAGTAGAAGATGACAAGGAACGCTTTGCTATTCTAAATCATTACCTAGATGGTTTCCGTGGTACAGTCT
TCCGCCAGACCCAATTTGCCGAGTTTGAACAAGCTATCTATAAGGCAGACCAGGAAGGTCAGGTCTTGACGGCTGATTTC
CTCAATGAATTGTACGGTCAGACAAACGAGAAATATTACGGACTTTCTGCCGAAGAAAATCCAGAAATCCAGTTTGAGTG
GGCTCGTATTCCACACTTCTATTACAATTTCTATGTCTATCAGTATGCGACAGGTTTCGCAGCAGCATCAGCTCTAGCAA
ACAAGATTGTCAATGGTAGTCCAGAAGACAAAGAAAACTATCTCAACTACTTGAAGGCTGGTAGCTCAGATTATTCCCTC
AATGTCATTGCCAAAGCAGGTGTAGACATGACCAAGGAAGATTACCTCAATGATGCCTTCAAGGTATTTGAAGCCCGTTT
GGAAGAATTAGAAGCTCTCGTTGAGAAAGGTGTGCACCTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
69.833 |
100 |
0.698 |