Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | GRI05_RS00405 | Genome accession | NZ_CP047248 |
| Coordinates | 71546..71812 (+) | Length | 88 a.a. |
| NCBI ID | WP_014635810.1 | Uniprot ID | A0A2K1SXG9 |
| Organism | Streptococcus suis strain LSM178 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 66546..76812
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GRI05_RS00370 (GRI05_00385) | cinA | 66552..67733 (+) | 1182 | WP_012774894.1 | competence/damage-inducible protein A | Machinery gene |
| GRI05_RS00375 (GRI05_00390) | recA | 67785..68936 (+) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
| GRI05_RS00380 (GRI05_00395) | spx | 69172..69570 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| GRI05_RS00385 (GRI05_00400) | - | 69670..69936 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| GRI05_RS00390 (GRI05_00405) | ruvX | 69936..70355 (+) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| GRI05_RS00395 (GRI05_00410) | - | 70367..70687 (+) | 321 | WP_002939343.1 | DUF1292 domain-containing protein | - |
| GRI05_RS00400 (GRI05_00415) | - | 70895..71473 (+) | 579 | WP_012774895.1 | nucleotidyltransferase family protein | - |
| GRI05_RS00405 (GRI05_00420) | comX/sigX | 71546..71812 (+) | 267 | WP_014635810.1 | hypothetical protein | Regulator |
| GRI05_RS00410 (GRI05_00425) | rpsJ | 72136..72444 (+) | 309 | WP_011922546.1 | 30S ribosomal protein S10 | - |
| GRI05_RS00415 (GRI05_00430) | rplC | 72541..73167 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| GRI05_RS00420 (GRI05_00435) | rplD | 73192..73815 (+) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| GRI05_RS00425 (GRI05_00440) | - | 73815..74114 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| GRI05_RS00430 (GRI05_00445) | rplB | 74132..74965 (+) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| GRI05_RS00435 (GRI05_00450) | rpsS | 75216..75497 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| GRI05_RS00440 (GRI05_00455) | rplV | 75515..75859 (+) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| GRI05_RS00445 (GRI05_00460) | rpsC | 75872..76525 (+) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10670.50 Da Isoelectric Point: 9.1949
>NTDB_id=411834 GRI05_RS00405 WP_014635810.1 71546..71812(+) (comX/sigX) [Streptococcus suis strain LSM178]
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=411834 GRI05_RS00405 WP_014635810.1 71546..71812(+) (comX/sigX) [Streptococcus suis strain LSM178]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis isolate S10 |
71.233 |
82.955 |
0.591 |
| comX/sigX | Streptococcus suis P1/7 |
71.233 |
82.955 |
0.591 |