Detailed information NTG0411811

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: GSQ19_RS04065
• Genome accession: NZ_CP047242
• Coordinates: 1052892..1054520 (+)
• Length: 542 a.a.
• NCBI ID: WP_041456500.1
• Uniprot ID: -
• Organism: Trichormus variabilis 0441
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1047892..1059520

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GSQ19_RS04055 (GSQ19_04055)	-	1049562..1051592 (+)	2031	WP_011321513.1	serine/threonine-protein kinase	-
GSQ19_RS04060 (GSQ19_04060)	-	1051609..1052778 (-)	1170	WP_011321514.1	cysteine desulfurase family protein	-
GSQ19_RS04065 (GSQ19_04065)	comA	1052892..1054520 (+)	1629	WP_041456500.1	DUF655 domain-containing protein	Machinery gene
GSQ19_RS04070 (GSQ19_04070)	-	1054621..1055103 (-)	483	WP_041456504.1	gluconokinase	-
GSQ19_RS04075 (GSQ19_04075)	sfsA	1055112..1055837 (-)	726	WP_011321517.1	DNA/RNA nuclease SfsA	-
GSQ19_RS04080 (GSQ19_04080)	-	1056309..1056977 (+)	669	WP_011321518.1	2OG-Fe dioxygenase family protein	-
GSQ19_RS04085 (GSQ19_04085)	gltX	1057061..1058506 (-)	1446	WP_011321519.1	glutamate--tRNA ligase	-

Sequence

Protein

• Length: 542 a.a.
• Molecular weight: 61021.15 Da
• Isoelectric Point: 7.8981

>NTDB_id=411811 GSQ19_RS04065 WP_041456500.1 1052892..1054520(+) (comA) [Trichormus variabilis 0441]
MRIFPAFRNFWVFFLIVAIAACQKVQSHNNRPAPLPQDSFVKVYFNQSESSEYREPYRQQTRLGDNLEQQIIDAISQAKS
TIDVAVQELRLPRIAQALKDKQKAGIKVRVILENTYTRSLSNLTPDEVKKLPEREQARYQEYFKFVDLNQDNQLSPEEVN
QRDALIILQNAKIPWIDDQADGSAGSKLMHHKFVVVDNRIVIVTSANFTLSDVFGDFSNSSSLGNANNLLHIDSPELAAL
VTEEFNLMWGDGVGGKPDSKFGLNKPVRPPQKITLGDNTITVHFSPTSPTLPWTQSSNGLINESLNLANKSIDMALFVFS
EQRLANTLEKRHQQQVSIRALIDKQFAYRYYSEALDMMGIALGNKCRYEIDNRPWSNPVTTVGVPTLREGDLLHHKFSVI
DNQTVITGSHNWSDAANHGNDETLIVINNPTIAAHYEREFARLYAKAQVGVPAKVQAQIQQEQKQCGQIKTPTSSELTPT
QVVNINTANLAELETLPGVGKKLAQKIITARQQRKFVSSQDLDKVPGISPKMIENWQGRIQF

Nucleotide

• Length: 1629 bp

>NTDB_id=411811 GSQ19_RS04065 WP_041456500.1 1052892..1054520(+) (comA) [Trichormus variabilis 0441]
GTGCGGATTTTCCCAGCATTTAGGAATTTTTGGGTATTTTTTTTGATAGTGGCGATCGCCGCCTGTCAAAAAGTCCAATC
TCACAATAATCGTCCTGCACCTCTACCGCAAGACTCATTTGTGAAAGTTTACTTTAATCAATCCGAATCCTCAGAATATC
GAGAACCTTACCGTCAACAAACTCGACTGGGAGATAACTTAGAACAGCAGATTATTGACGCTATTTCTCAAGCTAAATCT
ACTATCGATGTAGCAGTACAAGAATTGCGTTTACCGAGAATCGCCCAAGCCCTCAAAGACAAACAAAAAGCGGGAATCAA
AGTCAGAGTAATTTTAGAAAATACCTATACTCGTTCTTTGAGTAACTTGACACCAGATGAAGTCAAGAAATTACCTGAAC
GGGAACAAGCACGCTATCAAGAATACTTTAAATTTGTAGACCTAAACCAAGATAATCAACTCAGTCCTGAGGAAGTTAAT
CAGAGGGATGCACTGATAATTTTACAAAATGCCAAAATTCCTTGGATAGATGATCAAGCTGATGGTTCAGCAGGTAGTAA
GTTGATGCACCATAAGTTTGTGGTTGTAGATAATCGCATAGTAATTGTGACTTCGGCAAACTTCACCTTAAGCGACGTTT
TCGGGGATTTCTCTAATTCTTCAAGTTTGGGAAATGCCAACAACCTATTACACATTGATAGCCCAGAATTAGCAGCTTTG
GTCACAGAAGAATTCAACCTCATGTGGGGTGATGGTGTTGGAGGTAAACCAGACAGTAAATTCGGTTTAAATAAACCTGT
ACGTCCTCCCCAAAAAATTACCTTGGGTGACAACACAATTACTGTGCATTTTTCCCCAACTTCACCCACCTTACCTTGGA
CTCAAAGCAGCAATGGCTTAATTAATGAAAGCTTAAATTTAGCGAATAAATCTATTGATATGGCGTTGTTTGTTTTTTCC
GAACAGCGTCTTGCTAATACATTAGAAAAACGTCATCAACAACAAGTCTCAATTCGAGCATTAATTGATAAACAATTCGC
CTATCGTTATTACAGCGAAGCTTTAGATATGATGGGAATTGCCCTGGGTAATAAATGCCGATATGAAATTGATAATCGAC
CTTGGTCTAATCCCGTTACTACGGTGGGCGTACCCACTTTACGAGAAGGAGACCTGCTACACCATAAATTTTCTGTTATC
GACAACCAAACGGTAATTACAGGTTCTCACAACTGGTCTGATGCAGCAAATCATGGCAATGATGAGACTTTGATAGTAAT
TAATAATCCCACAATTGCTGCTCATTATGAGCGTGAATTTGCTCGTCTTTACGCTAAAGCTCAAGTCGGTGTCCCAGCCA
AAGTCCAAGCACAAATTCAACAAGAACAAAAGCAATGTGGTCAAATTAAAACTCCTACTTCCAGTGAACTTACTCCTACT
CAAGTGGTGAATATCAATACAGCAAATTTGGCAGAATTGGAGACCTTACCCGGTGTAGGTAAAAAGCTAGCCCAAAAAAT
TATCACCGCCCGTCAGCAGAGAAAATTTGTCTCATCACAAGACTTGGATAAAGTACCTGGAATCAGTCCAAAGATGATAG
AAAATTGGCAAGGGCGTATTCAATTTTAG

Domains

Predicted by InterproScan.

• PLD-like domain (PLDc_2) (71-249)

• PLD-like domain (PLDc_2) (302-443)

• Helix-hairpin-helix motif (HHH_3) (481-540)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Synechocystis sp. PCC 6803	49.355	100	0.494