Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BCO26_RS03605 Genome accession   NC_015634
Coordinates   747543..748493 (+) Length   316 a.a.
NCBI ID   WP_041818809.1    Uniprot ID   A0A150K5U0
Organism   Heyndrickxia coagulans 2-6     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 742543..753493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCO26_RS03585 (BCO26_0681) - 742948..743931 (+) 984 WP_013858638.1 homoserine dehydrogenase -
  BCO26_RS03595 (BCO26_0682) - 744382..745818 (+) 1437 WP_013858639.1 S41 family peptidase -
  BCO26_RS03600 (BCO26_0683) - 746087..747283 (+) 1197 WP_235601567.1 PDZ domain-containing protein -
  BCO26_RS03605 (BCO26_0685) ceuB 747543..748493 (+) 951 WP_041818809.1 ABC transporter permease Machinery gene
  BCO26_RS03610 (BCO26_0686) - 748486..749436 (+) 951 WP_013858643.1 iron chelate uptake ABC transporter family permease subunit -
  BCO26_RS03615 (BCO26_0687) - 749430..750188 (+) 759 WP_013858644.1 ABC transporter ATP-binding protein -
  BCO26_RS03620 (BCO26_0688) - 750203..751141 (+) 939 WP_013858645.1 siderophore ABC transporter substrate-binding protein -
  BCO26_RS03625 (BCO26_0689) - 751513..752262 (-) 750 WP_013858646.1 hypothetical protein -
  BCO26_RS03630 - 752306..752614 (-) 309 WP_041818812.1 DUF5316 domain-containing protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34465.57 Da        Isoelectric Point: 9.9995

>NTDB_id=41170 BCO26_RS03605 WP_041818809.1 747543..748493(+) (ceuB) [Heyndrickxia coagulans 2-6]
MKKRYLVPLLAVLSIISIFIGAENIRPADMLHLSREQTEILLASRLPRLISIIIAGMGMSICGLVMQQLTRNKFVSPTTA
GTMDCARLGILVAIILFSAANPLIKIAVAFCFALAGTLLFMKILGRIKWNDTIFIPLVGLMFGNIVSSVSTFFAYKYDLV
QSLSSWLQGDFSGVLKGKYEMLYLAVPAVLVAYVFANRFTVAGMGEDFAKNLGLNYKQVVNLGLVLVALITSATVLTVGT
IPFLGLIIPNIVSIYRGDHMKKSITVTALLGAVFLLFCDILGRIVIYPYEVPISLTAGIIGSGIFVYLLLRRHAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=41170 BCO26_RS03605 WP_041818809.1 747543..748493(+) (ceuB) [Heyndrickxia coagulans 2-6]
ATGAAAAAAAGATATTTAGTGCCCCTGCTTGCCGTGCTGTCCATCATTTCGATTTTTATCGGCGCGGAAAATATCAGGCC
GGCGGATATGCTCCATTTAAGCAGGGAGCAGACAGAAATTTTGCTGGCAAGCCGCCTGCCGCGCCTGATCAGCATCATCA
TTGCGGGCATGGGCATGAGCATCTGCGGCCTTGTGATGCAGCAGCTGACGAGAAATAAATTTGTCTCCCCGACGACAGCC
GGCACGATGGACTGTGCCCGGCTCGGCATTTTGGTTGCGATCATCCTGTTTTCTGCGGCAAACCCGCTGATCAAAATTGC
GGTTGCTTTTTGCTTTGCGCTGGCTGGCACCTTGCTGTTCATGAAAATACTGGGCCGGATTAAATGGAACGATACAATTT
TCATCCCGCTTGTCGGGCTGATGTTTGGCAATATCGTAAGTTCTGTATCTACTTTTTTTGCGTATAAATACGACTTAGTC
CAGAGCCTTTCCTCATGGCTGCAAGGCGATTTTTCAGGCGTGCTGAAAGGGAAGTACGAGATGCTTTATTTAGCAGTTCC
GGCCGTTTTGGTCGCGTATGTGTTTGCCAACCGGTTTACGGTCGCCGGCATGGGGGAAGATTTTGCCAAAAATCTTGGCT
TGAATTACAAGCAGGTGGTCAACCTCGGCCTTGTCCTTGTCGCGCTGATTACTTCGGCAACGGTACTGACAGTCGGCACT
ATCCCGTTTCTGGGCTTAATTATTCCAAACATTGTGTCCATTTACCGTGGCGACCATATGAAAAAAAGCATTACGGTTAC
GGCACTGCTTGGGGCAGTGTTCCTGCTGTTTTGCGATATTTTGGGGCGCATTGTCATTTATCCGTATGAAGTGCCGATCA
GTTTAACAGCCGGCATCATCGGGAGCGGCATTTTTGTATATTTGCTGCTGAGGAGGCACGCTTATGCATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A150K5U0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.438

99.051

0.509

Multiple sequence alignment