Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   GRT08_RS05745 Genome accession   NZ_CP047234
Coordinates   1102269..1102925 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus amyloliquefaciens strain FJ4     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1097269..1107925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GRT08_RS05720 (GRT08_05670) oppF 1097798..1098715 (+) 918 WP_070081625.1 oligopeptide ABC transporter ATP-binding protein OppF -
  GRT08_RS05725 (GRT08_05675) - 1098822..1100009 (+) 1188 WP_061890536.1 putative glycoside hydrolase -
  GRT08_RS05730 (GRT08_05680) - 1100127..1100705 (+) 579 WP_101562896.1 GNAT family N-acetyltransferase -
  GRT08_RS05735 (GRT08_05685) spx 1100884..1101279 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  GRT08_RS05740 (GRT08_05690) - 1101337..1101993 (-) 657 WP_061046903.1 TerC family protein -
  GRT08_RS05745 (GRT08_05695) mecA 1102269..1102925 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  GRT08_RS05750 (GRT08_05700) - 1103076..1104236 (+) 1161 WP_377803086.1 competence protein CoiA family protein -
  GRT08_RS05755 (GRT08_05705) pepF 1104464..1106293 (+) 1830 WP_003155028.1 oligoendopeptidase F Regulator
  GRT08_RS05760 - 1106331..1106498 (-) 168 WP_003155026.1 hypothetical protein -
  GRT08_RS05765 (GRT08_05710) spxH 1106784..1107686 (-) 903 WP_003155024.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=411670 GRT08_RS05745 WP_003155032.1 1102269..1102925(+) (mecA) [Bacillus amyloliquefaciens strain FJ4]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=411670 GRT08_RS05745 WP_003155032.1 1102269..1102925(+) (mecA) [Bacillus amyloliquefaciens strain FJ4]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895

Multiple sequence alignment