Detailed information NTG0411577

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: H5C78_RS22250
• Genome accession: NZ_CP059917
• Coordinates: 4623830..4624813 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain 64.1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4618830..4629813

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H5C78_RS22220 (H5C78_22220)	-	4619496..4619603 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
H5C78_RS22225 (H5C78_22225)	-	4619979..4620086 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
H5C78_RS22230 (H5C78_22230)	-	4620462..4620569 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
H5C78_RS22235 (H5C78_22235)	-	4620945..4621052 (-)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
H5C78_RS22240 (H5C78_22240)	yhjV	4621528..4622799 (+)	1272	WP_001318103.1	aromatic amino acid transport family protein	-
H5C78_RS22245 (H5C78_22245)	dppF	4622829..4623833 (-)	1005	WP_000107036.1	dipeptide ABC transporter ATP-binding subunit DppF	-
H5C78_RS22250 (H5C78_22250)	amiE	4623830..4624813 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
H5C78_RS22255 (H5C78_22255)	dppC	4624824..4625726 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
H5C78_RS22260 (H5C78_22260)	dppB	4625736..4626755 (-)	1020	WP_000938853.1	dipeptide ABC transporter permease DppB	-
H5C78_RS22265 (H5C78_22265)	-	4626773..4627000 (+)	228	WP_001696297.1	hypothetical protein	-
H5C78_RS22270 (H5C78_22270)	dppA	4627063..4628670 (-)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=411577 H5C78_RS22250 WP_001196486.1 4623830..4624813(-) (amiE) [Escherichia coli strain 64.1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=411577 H5C78_RS22250 WP_001196486.1 4623830..4624813(-) (amiE) [Escherichia coli strain 64.1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGGGAGTCTGGCTCCGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTTGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGTCGTCAGCGGGCGATTGACT
TGTTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATTGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCCGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGATAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTTGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404