Detailed information NTG0411565

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: GR342_RS05385
• Genome accession: NZ_CP047216
• Coordinates: 1053004..1053741 (+)
• Length: 245 a.a.
• NCBI ID: WP_002834520.1
• Uniprot ID: -
• Organism: Campylobacter coli strain SH89
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1048004..1058741

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GR342_RS05355 (GR342_05295)	rpsF	1048152..1048529 (+)	378	WP_002777082.1	30S ribosomal protein S6	-
GR342_RS05360 (GR342_05300)	-	1048538..1049086 (+)	549	WP_002777084.1	single-stranded DNA-binding protein	-
GR342_RS05365 (GR342_05305)	rpsR	1049097..1049357 (+)	261	WP_002777087.1	30S ribosomal protein S18	-
GR342_RS05370 (GR342_05310)	lon	1049413..1051788 (-)	2376	WP_002783351.1	endopeptidase La	-
GR342_RS05375 (GR342_05315)	bamD	1051804..1052451 (-)	648	WP_002780248.1	outer membrane protein assembly factor BamD	-
GR342_RS05380 (GR342_05320)	fliW	1052615..1053004 (+)	390	WP_002777093.1	flagellar assembly protein FliW	-
GR342_RS05385 (GR342_05325)	proC	1053004..1053741 (+)	738	WP_002834520.1	pyrroline-5-carboxylate reductase	Machinery gene
GR342_RS05390 (GR342_05330)	ctsT	1053738..1054043 (+)	306	WP_002777852.1	hypothetical protein	Machinery gene
GR342_RS05395 (GR342_05335)	-	1054036..1054704 (+)	669	WP_002780245.1	hypothetical protein	-
GR342_RS05400 (GR342_05340)	-	1054701..1055153 (+)	453	WP_002777117.1	hypothetical protein	-
GR342_RS05405 (GR342_05345)	-	1055146..1055775 (-)	630	WP_002780243.1	uroporphyrinogen-III synthase	-
GR342_RS05410 (GR342_05350)	thiE	1055753..1056385 (-)	633	WP_002777120.1	thiamine phosphate synthase	-
GR342_RS05415 (GR342_05355)	thiD	1056375..1057187 (-)	813	WP_002786353.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
GR342_RS05420 (GR342_05360)	-	1057187..1057870 (-)	684	WP_002780240.1	3-methyladenine DNA glycosylase	-
GR342_RS05425 (GR342_05365)	-	1057867..1058628 (-)	762	WP_072212081.1	ATP-binding protein	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26796.25 Da
• Isoelectric Point: 9.5957

>NTDB_id=411565 GR342_RS05385 WP_002834520.1 1053004..1053741(+) (proC) [Campylobacter coli strain SH89]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYKLNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=411565 GR342_RS05385 WP_002834520.1 1053004..1053741(+) (proC) [Campylobacter coli strain SH89]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAG
AAATTTTAAATACTTTTGGCAAAGCTTATAAGTTAAACGAAGAAAAACAAATGAATGCTGCCATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCTAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTTT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAGCCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACCATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTTTTTGAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	81.25	97.959	0.796