Detailed information NTG0411453

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: GR340_RS06135
• Genome accession: NZ_CP047197
• Coordinates: 1146533..1147270 (+)
• Length: 245 a.a.
• NCBI ID: WP_233908840.1
• Uniprot ID: -
• Organism: Campylobacter coli strain JZ_1_95
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1141533..1152270

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GR340_RS06105 (GR340_05995)	rpsF	1141680..1142057 (+)	378	WP_002777082.1	30S ribosomal protein S6	-
GR340_RS06110 (GR340_06000)	-	1142066..1142614 (+)	549	WP_002780252.1	single-stranded DNA-binding protein	-
GR340_RS06115 (GR340_06005)	rpsR	1142625..1142885 (+)	261	WP_002777087.1	30S ribosomal protein S18	-
GR340_RS06120 (GR340_06010)	lon	1142942..1145317 (-)	2376	WP_277737290.1	endopeptidase La	-
GR340_RS06125 (GR340_06015)	bamD	1145333..1145980 (-)	648	WP_002780248.1	outer membrane protein assembly factor BamD	-
GR340_RS06130 (GR340_06020)	fliW	1146144..1146533 (+)	390	WP_002777093.1	flagellar assembly protein FliW	-
GR340_RS06135 (GR340_06025)	proC	1146533..1147270 (+)	738	WP_233908840.1	pyrroline-5-carboxylate reductase	Machinery gene
GR340_RS06140 (GR340_06030)	ctsT	1147267..1147572 (+)	306	WP_002777852.1	hypothetical protein	Machinery gene
GR340_RS06145 (GR340_06035)	-	1147565..1148233 (+)	669	WP_002790524.1	hypothetical protein	-
GR340_RS06150 (GR340_06040)	-	1148230..1148682 (+)	453	WP_002777117.1	hypothetical protein	-
GR340_RS06155 (GR340_06045)	-	1148675..1149304 (-)	630	WP_233908841.1	uroporphyrinogen-III synthase	-
GR340_RS06160 (GR340_06050)	thiE	1149282..1149914 (-)	633	WP_277737291.1	thiamine phosphate synthase	-
GR340_RS06165 (GR340_06055)	thiD	1149904..1150716 (-)	813	WP_063266019.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
GR340_RS06170 (GR340_06060)	-	1150716..1151399 (-)	684	WP_002777124.1	3-methyladenine DNA glycosylase	-
GR340_RS06175 (GR340_06065)	-	1151396..1152157 (-)	762	WP_025443303.1	ATP-binding protein	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26796.25 Da
• Isoelectric Point: 9.5957

>NTDB_id=411453 GR340_RS06135 WP_233908840.1 1146533..1147270(+) (proC) [Campylobacter coli strain JZ_1_95]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIKILNTFGKAYELNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=411453 GR340_RS06135 WP_233908840.1 1146533..1147270(+) (proC) [Campylobacter coli strain JZ_1_95]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAA
AAATTTTAAATACTTTTGGCAAAGCTTATGAGTTAAACGAAGAAAAACAAATGAATGCTGCCATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCTAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTTT
AAATCTCACTCGTTCACTTTTTAAAAGTGCTGCAGCCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACCATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTTTTTGAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	80.833	97.959	0.792