Detailed information NTG0411220

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GQF93_RS13765
• Genome accession: NZ_CP059835
• Coordinates: 2818445..2819428 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain tcmA_3
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2813445..2824428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GQF93_RS13740 (GQF93_13740)	-	2814594..2814701 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GQF93_RS13745 (GQF93_13745)	-	2815077..2815184 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GQF93_RS13750 (GQF93_13750)	-	2815560..2815667 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GQF93_RS13755 (GQF93_13755)	yhjV	2816143..2817414 (+)	1272	WP_097432891.1	aromatic amino acid transport family protein	-
GQF93_RS13760 (GQF93_13760)	dppF	2817444..2818448 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
GQF93_RS13765 (GQF93_13765)	amiE	2818445..2819428 (-)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
GQF93_RS13770 (GQF93_13770)	dppC	2819439..2820341 (-)	903	WP_000084681.1	dipeptide ABC transporter permease DppC	-
GQF93_RS13775 (GQF93_13775)	dppB	2820351..2821370 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
GQF93_RS13780 (GQF93_13780)	dppA	2821678..2823285 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=411220 GQF93_RS13765 WP_001196496.1 2818445..2819428(-) (amiE) [Escherichia coli strain tcmA_3]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=411220 GQF93_RS13765 WP_001196496.1 2818445..2819428(-) (amiE) [Escherichia coli strain tcmA_3]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401