Detailed information NTG0411175

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: GRT15_RS16890
• Genome accession: NZ_CP047157
• Coordinates: 3457293..3458456 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain FJAT-45028
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3452293..3463456

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GRT15_RS16860 (GRT15_16860)	-	3452558..3452977 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
GRT15_RS16865 (GRT15_16865)	comFC	3453051..3453740 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
GRT15_RS16870 (GRT15_16870)	-	3453746..3454030 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
GRT15_RS16875 (GRT15_16875)	comFA	3454088..3455473 (-)	1386	WP_044052858.1	DEAD/DEAH box helicase	Machinery gene
GRT15_RS16880 (GRT15_16880)	-	3455581..3456429 (-)	849	WP_044052857.1	DegV family protein	-
GRT15_RS16885 (GRT15_16885)	degU	3456527..3457216 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
GRT15_RS16890 (GRT15_16890)	degS	3457293..3458456 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
GRT15_RS16895 (GRT15_16895)	-	3458678..3459325 (+)	648	WP_003151384.1	YigZ family protein	-
GRT15_RS16900 (GRT15_16900)	-	3459330..3460544 (+)	1215	WP_003151383.1	LCP family protein	-
GRT15_RS16905 (GRT15_16905)	-	3460634..3461710 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
GRT15_RS16910 (GRT15_16910)	tuaH	3461843..3463039 (-)	1197	WP_044052856.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=411175 GRT15_RS16890 WP_003151385.1 3457293..3458456(-) (degS) [Bacillus velezensis strain FJAT-45028]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=411175 GRT15_RS16890 WP_003151385.1 3457293..3458456(-) (degS) [Bacillus velezensis strain FJAT-45028]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948