Detailed information
Bioinformatically predicted
Overview
| Name | exbB | Type | Machinery gene |
| Locus tag | GST84_RS19340 | Genome accession | NZ_CP047152 |
| Coordinates | 4149487..4150122 (-) | Length | 211 a.a. |
| NCBI ID | WP_031322710.1 | Uniprot ID | A0A1X1A0J8 |
| Organism | Pseudomonas putida strain PP27 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4144487..4155122
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GST84_RS19310 (GST84_19025) | murB | 4145584..4146603 (-) | 1020 | WP_021784974.1 | UDP-N-acetylmuramate dehydrogenase | - |
| GST84_RS19315 (GST84_19030) | - | 4146600..4147064 (-) | 465 | WP_019752229.1 | low molecular weight protein-tyrosine-phosphatase | - |
| GST84_RS19320 (GST84_19035) | kdsB | 4147064..4147828 (-) | 765 | WP_021784973.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| GST84_RS19325 (GST84_19040) | - | 4147825..4148010 (-) | 186 | WP_003247142.1 | Trm112 family protein | - |
| GST84_RS19330 (GST84_19045) | lpxK | 4148055..4149056 (-) | 1002 | WP_021784972.1 | tetraacyldisaccharide 4'-kinase | - |
| GST84_RS19335 (GST84_19050) | - | 4149056..4149490 (-) | 435 | WP_021784971.1 | biopolymer transporter ExbD | - |
| GST84_RS19340 (GST84_19055) | exbB | 4149487..4150122 (-) | 636 | WP_031322710.1 | MotA/TolQ/ExbB proton channel family protein | Machinery gene |
| GST84_RS19345 (GST84_19060) | comA | 4151590..4153803 (-) | 2214 | WP_238090201.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| GST84_RS19350 (GST84_19065) | - | 4153946..4154452 (+) | 507 | Protein_3788 | DUF2062 domain-containing protein | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 22857.14 Da Isoelectric Point: 7.3616
>NTDB_id=411060 GST84_RS19340 WP_031322710.1 4149487..4150122(-) (exbB) [Pseudomonas putida strain PP27]
MWELVKSGGWMMLPIILSSIAAMAIVVERLWTLRASRVTPPHLLGQVWIWIKDKQLTSDKLKALRADSPLGEILAAGLAN
SRHGREIMKECIEEAASRVIHELERYISTLGTIAAMAPLLGLLGTVLGMIDIFSAFMGSQMTANAAVLASGISKALVTTA
AGLMVGIPAVFFHRFLLRRIDELVIGMEQEAIKLVEVIQGDREVEVAGGKG
MWELVKSGGWMMLPIILSSIAAMAIVVERLWTLRASRVTPPHLLGQVWIWIKDKQLTSDKLKALRADSPLGEILAAGLAN
SRHGREIMKECIEEAASRVIHELERYISTLGTIAAMAPLLGLLGTVLGMIDIFSAFMGSQMTANAAVLASGISKALVTTA
AGLMVGIPAVFFHRFLLRRIDELVIGMEQEAIKLVEVIQGDREVEVAGGKG
Nucleotide
Download Length: 636 bp
>NTDB_id=411060 GST84_RS19340 WP_031322710.1 4149487..4150122(-) (exbB) [Pseudomonas putida strain PP27]
GTGTGGGAATTGGTCAAGTCCGGTGGTTGGATGATGCTGCCGATCATTCTGAGCTCCATCGCTGCCATGGCTATCGTCGT
CGAACGGCTGTGGACCTTGCGCGCCAGTCGCGTCACCCCGCCGCACCTGCTGGGCCAGGTGTGGATTTGGATCAAGGACA
AGCAACTGACCAGTGACAAGCTCAAGGCCCTGCGTGCCGATTCGCCACTGGGGGAAATCCTCGCGGCGGGCCTGGCCAAT
TCGCGTCACGGTCGGGAAATCATGAAAGAGTGCATCGAGGAGGCCGCCTCGCGCGTCATCCACGAACTGGAACGCTACAT
CAGTACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGCCTGCTGGGCACCGTGCTGGGTATGATCGACATTTTCA
GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTACTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCG
GCTGGCCTGATGGTCGGTATCCCGGCGGTGTTCTTCCACCGCTTCCTGCTGCGTCGCATTGATGAACTGGTGATCGGCAT
GGAGCAGGAGGCGATCAAGCTGGTGGAAGTGATCCAGGGCGACCGTGAAGTGGAAGTGGCCGGAGGCAAGGGGTGA
GTGTGGGAATTGGTCAAGTCCGGTGGTTGGATGATGCTGCCGATCATTCTGAGCTCCATCGCTGCCATGGCTATCGTCGT
CGAACGGCTGTGGACCTTGCGCGCCAGTCGCGTCACCCCGCCGCACCTGCTGGGCCAGGTGTGGATTTGGATCAAGGACA
AGCAACTGACCAGTGACAAGCTCAAGGCCCTGCGTGCCGATTCGCCACTGGGGGAAATCCTCGCGGCGGGCCTGGCCAAT
TCGCGTCACGGTCGGGAAATCATGAAAGAGTGCATCGAGGAGGCCGCCTCGCGCGTCATCCACGAACTGGAACGCTACAT
CAGTACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGCCTGCTGGGCACCGTGCTGGGTATGATCGACATTTTCA
GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTACTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCG
GCTGGCCTGATGGTCGGTATCCCGGCGGTGTTCTTCCACCGCTTCCTGCTGCGTCGCATTGATGAACTGGTGATCGGCAT
GGAGCAGGAGGCGATCAAGCTGGTGGAAGTGATCCAGGGCGACCGTGAAGTGGAAGTGGCCGGAGGCAAGGGGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| exbB | Pseudomonas stutzeri DSM 10701 |
81.905 |
99.526 |
0.815 |