Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GQ674_RS14325 Genome accession   NZ_CP047135
Coordinates   3162696..3163097 (-) Length   133 a.a.
NCBI ID   WP_017356958.1    Uniprot ID   A0A6P1EKV5
Organism   Stenotrophomonas sp. 364     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3157696..3168097
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GQ674_RS14310 (GQ674_14310) - 3159705..3161741 (-) 2037 WP_159497609.1 methyl-accepting chemotaxis protein -
  GQ674_RS14315 (GQ674_14315) - 3161786..3162316 (-) 531 WP_038686785.1 chemotaxis protein CheW -
  GQ674_RS14320 (GQ674_14320) - 3162316..3162678 (-) 363 WP_038686783.1 response regulator -
  GQ674_RS14325 (GQ674_14325) pilG 3162696..3163097 (-) 402 WP_017356958.1 twitching motility response regulator PilG Regulator
  GQ674_RS14330 (GQ674_14330) gshB 3163345..3164295 (+) 951 WP_128097898.1 glutathione synthase -
  GQ674_RS14335 (GQ674_14335) - 3164292..3165179 (+) 888 WP_159497610.1 energy transducer TonB -
  GQ674_RS14340 (GQ674_14340) tsaB 3165242..3165949 (-) 708 WP_159497611.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  GQ674_RS14345 (GQ674_14345) - 3165955..3168015 (-) 2061 WP_159497612.1 ATP-dependent DNA helicase -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14674.04 Da        Isoelectric Point: 6.3483

>NTDB_id=410922 GQ674_RS14325 WP_017356958.1 3162696..3163097(-) (pilG) [Stenotrophomonas sp. 364]
MTENMAAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=410922 GQ674_RS14325 WP_017356958.1 3162696..3163097(-) (pilG) [Stenotrophomonas sp. 364]
ATGACTGAAAACATGGCTGCGGGTGGGGAACTCGCAGGGCTTAGGGTCATGGTCATCGACGATTCGAAGACCATTCGCAG
GACCGCCGAAACACTGCTCAAGCGCGAAGGCTGCGAGGTGGTGACCGCGACCGATGGTTTCGAGGCGTTGGCCAAGATCG
CCGACCAACAGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGTCGACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGCTCGGAGCAGTACCTGACCAAGCCATTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6P1EKV5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment