Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | BABF1_RS06370 | Genome accession | NZ_CP047131 |
| Coordinates | 1226232..1226555 (-) | Length | 107 a.a. |
| NCBI ID | WP_000578878.1 | Uniprot ID | A0A6L7H7A6 |
| Organism | Bacillus anthracis str. BF1 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1221232..1231555
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BABF1_RS06345 (BABF1_006345) | - | 1221539..1222825 (+) | 1287 | WP_000247038.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| BABF1_RS06350 (BABF1_006350) | sipW | 1223020..1223589 (+) | 570 | WP_000767813.1 | signal peptidase I SipW | - |
| BABF1_RS06355 (BABF1_006355) | - | 1223652..1224239 (+) | 588 | WP_000172839.1 | CalY family protein | - |
| BABF1_RS06360 (BABF1_006360) | - | 1224401..1225165 (+) | 765 | WP_000917476.1 | DUF4047 domain-containing protein | - |
| BABF1_RS06365 (BABF1_006365) | calY | 1225563..1226156 (+) | 594 | WP_000053732.1 | biofilm matrix protein CalY | - |
| BABF1_RS06370 (BABF1_006370) | sinR | 1226232..1226555 (-) | 324 | WP_000578878.1 | helix-turn-helix domain-containing protein | Regulator |
| BABF1_RS06375 (BABF1_006375) | - | 1226635..1226769 (-) | 135 | WP_000276214.1 | anti-repressor SinI family protein | - |
| BABF1_RS06380 (BABF1_006380) | inhA1 | 1227113..1229500 (+) | 2388 | WP_001035927.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| BABF1_RS06385 (BABF1_006385) | - | 1229672..1231039 (+) | 1368 | WP_000116805.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12319.17 Da Isoelectric Point: 9.6244
>NTDB_id=410867 BABF1_RS06370 WP_000578878.1 1226232..1226555(-) (sinR) [Bacillus anthracis str. BF1]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=410867 BABF1_RS06370 WP_000578878.1 1226232..1226555(-) (sinR) [Bacillus anthracis str. BF1]
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |