Detailed information
Bioinformatically predicted
Overview
| Name | rcrR | Type | Regulator |
| Locus tag | SGPB_RS06205 | Genome accession | NC_015600 |
| Coordinates | 1239315..1239755 (-) | Length | 146 a.a. |
| NCBI ID | WP_003065254.1 | Uniprot ID | E0PEB8 |
| Organism | Streptococcus pasteurianus ATCC 43144 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1231728..1255291 | 1239315..1239755 | within | 0 |
Gene organization within MGE regions
Location: 1231728..1255291
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SGPB_RS06170 (SGPB_1188) | - | 1231728..1232486 (-) | 759 | WP_172456431.1 | ABC transporter ATP-binding protein | - |
| SGPB_RS06175 (SGPB_1189) | - | 1232514..1233434 (-) | 921 | WP_013851962.1 | glycine betaine ABC transporter substrate-binding protein | - |
| SGPB_RS06180 (SGPB_1190) | - | 1233424..1234059 (-) | 636 | WP_013851963.1 | ABC transporter permease | - |
| SGPB_RS06185 (SGPB_1191) | - | 1234049..1234501 (-) | 453 | WP_003065246.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| SGPB_RS06190 (SGPB_1192) | - | 1234491..1235468 (-) | 978 | WP_013851964.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| SGPB_RS06195 (SGPB_1193) | rcrQ | 1235735..1237507 (-) | 1773 | WP_013851965.1 | ABC transporter ATP-binding protein | Regulator |
| SGPB_RS06200 (SGPB_1194) | rcrP | 1237497..1239311 (-) | 1815 | WP_003065252.1 | ABC transporter ATP-binding protein | Regulator |
| SGPB_RS06205 (SGPB_1195) | rcrR | 1239315..1239755 (-) | 441 | WP_003065254.1 | MarR family winged helix-turn-helix transcriptional regulator | Regulator |
| SGPB_RS06210 (SGPB_1196) | - | 1239930..1240340 (-) | 411 | WP_003065257.1 | peptide deformylase | - |
| SGPB_RS06215 (SGPB_1197) | - | 1240337..1240846 (-) | 510 | WP_003065260.1 | GNAT family N-acetyltransferase | - |
| SGPB_RS06220 (SGPB_1198) | gdhA | 1241123..1242472 (-) | 1350 | WP_003065263.1 | NADP-specific glutamate dehydrogenase | - |
| SGPB_RS06225 (SGPB_1199) | - | 1242718..1243215 (+) | 498 | WP_003065265.1 | DUF308 domain-containing protein | - |
| SGPB_RS11180 (SGPB_1200) | queF | 1243271..1243762 (-) | 492 | WP_003065267.1 | preQ(1) synthase | - |
| SGPB_RS11185 (SGPB_1201) | queE | 1243775..1244488 (-) | 714 | WP_003065269.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| SGPB_RS06240 (SGPB_1202) | queD | 1244481..1244927 (-) | 447 | WP_013851966.1 | 6-carboxytetrahydropterin synthase QueD | - |
| SGPB_RS06245 (SGPB_1203) | queC | 1244927..1245580 (-) | 654 | WP_013851967.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| SGPB_RS06250 (SGPB_1204) | - | 1245831..1247600 (-) | 1770 | WP_013851968.1 | ABC transporter ATP-binding protein | - |
| SGPB_RS06255 (SGPB_1205) | - | 1247603..1249342 (-) | 1740 | WP_013851969.1 | ABC transporter ATP-binding protein | - |
| SGPB_RS06260 (SGPB_1206) | - | 1249421..1251292 (-) | 1872 | WP_013851970.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| SGPB_RS06265 (SGPB_1207) | - | 1251289..1252494 (-) | 1206 | WP_013851971.1 | CCA tRNA nucleotidyltransferase | - |
| SGPB_RS06270 (SGPB_1208) | dapB | 1252491..1253258 (-) | 768 | WP_013851972.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| SGPB_RS06275 (SGPB_1209) | - | 1253278..1254126 (-) | 849 | WP_003065283.1 | DegV family protein | - |
| SGPB_RS06280 (SGPB_1210) | - | 1254126..1254506 (-) | 381 | WP_003065285.1 | DUF1149 family protein | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 17097.56 Da Isoelectric Point: 8.4684
>NTDB_id=41082 SGPB_RS06205 WP_003065254.1 1239315..1239755(-) (rcrR) [Streptococcus pasteurianus ATCC 43144]
MHKKDPFSQFRDFINLAENRVHALAESHGVENLAGPQGFAVLYLHDNPDKEIYIKDIEKRLRISKSVTSNLIKRMEKNGF
IQIISSIEDKRYKQVVLTELGKSKAQNIQDFYDEMHRQILAGVDHEDLKISFRVFDRILKNLENKE
MHKKDPFSQFRDFINLAENRVHALAESHGVENLAGPQGFAVLYLHDNPDKEIYIKDIEKRLRISKSVTSNLIKRMEKNGF
IQIISSIEDKRYKQVVLTELGKSKAQNIQDFYDEMHRQILAGVDHEDLKISFRVFDRILKNLENKE
Nucleotide
Download Length: 441 bp
>NTDB_id=41082 SGPB_RS06205 WP_003065254.1 1239315..1239755(-) (rcrR) [Streptococcus pasteurianus ATCC 43144]
ATGCATAAGAAAGATCCGTTTTCACAGTTTAGGGATTTTATCAATTTAGCGGAAAATCGTGTCCATGCTCTTGCGGAAAG
TCATGGTGTTGAAAATCTGGCTGGTCCACAGGGATTTGCAGTGTTGTATCTCCATGATAATCCTGATAAAGAAATTTATA
TCAAGGATATTGAGAAGAGACTAAGAATTTCAAAGTCAGTGACTAGTAATTTGATTAAGCGCATGGAGAAAAATGGTTTT
ATCCAAATTATTTCGTCAATAGAAGATAAGCGTTATAAGCAAGTGGTGTTGACTGAACTTGGAAAATCAAAGGCTCAAAA
CATTCAAGATTTCTATGATGAAATGCATAGACAAATCTTAGCTGGTGTTGACCATGAGGATCTCAAAATTTCGTTTCGCG
TCTTTGACCGCATTTTGAAAAATTTAGAAAACAAGGAGTAA
ATGCATAAGAAAGATCCGTTTTCACAGTTTAGGGATTTTATCAATTTAGCGGAAAATCGTGTCCATGCTCTTGCGGAAAG
TCATGGTGTTGAAAATCTGGCTGGTCCACAGGGATTTGCAGTGTTGTATCTCCATGATAATCCTGATAAAGAAATTTATA
TCAAGGATATTGAGAAGAGACTAAGAATTTCAAAGTCAGTGACTAGTAATTTGATTAAGCGCATGGAGAAAAATGGTTTT
ATCCAAATTATTTCGTCAATAGAAGATAAGCGTTATAAGCAAGTGGTGTTGACTGAACTTGGAAAATCAAAGGCTCAAAA
CATTCAAGATTTCTATGATGAAATGCATAGACAAATCTTAGCTGGTGTTGACCATGAGGATCTCAAAATTTCGTTTCGCG
TCTTTGACCGCATTTTGAAAAATTTAGAAAACAAGGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrR | Streptococcus mutans UA159 |
55.944 |
97.945 |
0.548 |