Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | GQ677_RS10100 | Genome accession | NZ_CP047120 |
| Coordinates | 1983428..1984381 (-) | Length | 317 a.a. |
| NCBI ID | WP_136274080.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain 1085 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1978428..1989381
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQ677_RS10070 (GQ677_10070) | - | 1978647..1978964 (-) | 318 | WP_011285355.1 | thioredoxin family protein | - |
| GQ677_RS10075 (GQ677_10075) | - | 1978961..1979245 (-) | 285 | WP_002992749.1 | DUF4651 domain-containing protein | - |
| GQ677_RS10080 (GQ677_10080) | pepA | 1979710..1980777 (+) | 1068 | WP_136263717.1 | glutamyl aminopeptidase | - |
| GQ677_RS10085 (GQ677_10085) | proC | 1980825..1981595 (+) | 771 | WP_136274084.1 | pyrroline-5-carboxylate reductase | - |
| GQ677_RS10090 (GQ677_10090) | - | 1981678..1981986 (-) | 309 | WP_010921804.1 | hypothetical protein | - |
| GQ677_RS10095 (GQ677_10095) | - | 1982173..1983369 (-) | 1197 | WP_023612537.1 | acetate kinase | - |
| GQ677_RS10100 (GQ677_10100) | comYH | 1983428..1984381 (-) | 954 | WP_136274080.1 | class I SAM-dependent methyltransferase | Machinery gene |
| GQ677_RS10105 (GQ677_10105) | comGG | 1984479..1984805 (-) | 327 | WP_136274078.1 | competence type IV pilus minor pilin ComGG | - |
| GQ677_RS10110 (GQ677_10110) | comYF | 1984789..1985223 (-) | 435 | WP_023612536.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| GQ677_RS10115 (GQ677_10115) | comGE | 1985216..1985500 (-) | 285 | WP_002987779.1 | competence type IV pilus minor pilin ComGE | - |
| GQ677_RS10120 (GQ677_10120) | comGD | 1985457..1985885 (-) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | - |
| GQ677_RS10125 (GQ677_10125) | comYC | 1985860..1986186 (-) | 327 | WP_032465607.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GQ677_RS10130 (GQ677_10130) | comYB | 1986188..1987222 (-) | 1035 | WP_011054115.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GQ677_RS10135 (GQ677_10135) | comYA | 1987158..1988096 (-) | 939 | WP_002986557.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GQ677_RS10140 (GQ677_10140) | - | 1988189..1988554 (-) | 366 | WP_002986560.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36013.13 Da Isoelectric Point: 4.7205
>NTDB_id=410766 GQ677_RS10100 WP_136274080.1 1983428..1984381(-) (comYH) [Streptococcus pyogenes strain 1085]
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLVPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLVPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=410766 GQ677_RS10100 WP_136274080.1 1983428..1984381(-) (comYH) [Streptococcus pyogenes strain 1085]
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAAATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGTACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACACTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAAATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGTACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACACTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
65.823 |
99.685 |
0.656 |
| comYH | Streptococcus mutans UA140 |
65.506 |
99.685 |
0.653 |