Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   GQ677_RS01095 Genome accession   NZ_CP047120
Coordinates   179700..180413 (-) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 1085     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 174700..185413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GQ677_RS10295 - 174850..174996 (+) 147 WP_002982210.1 hypothetical protein -
  GQ677_RS01065 (GQ677_01065) - 175025..175960 (+) 936 WP_010922750.1 Gfo/Idh/MocA family protein -
  GQ677_RS01070 (GQ677_01070) - 175969..176478 (+) 510 WP_011018311.1 GNAT family N-acetyltransferase -
  GQ677_RS01075 (GQ677_01075) nrdG 176478..177092 (+) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  GQ677_RS01080 (GQ677_01080) yaaA 177266..177997 (-) 732 WP_010922748.1 peroxide stress protein YaaA -
  GQ677_RS01085 (GQ677_01085) - 178039..178896 (-) 858 WP_136273972.1 VOC family protein -
  GQ677_RS01090 (GQ677_01090) - 179083..179421 (+) 339 Protein_154 winged helix-turn-helix transcriptional regulator -
  GQ677_RS01095 (GQ677_01095) treR 179700..180413 (-) 714 WP_002992823.1 trehalose operon repressor Regulator
  GQ677_RS01100 (GQ677_01100) treP 180624..182648 (+) 2025 WP_010922746.1 PTS system trehalose-specific EIIBC component -
  GQ677_RS01105 (GQ677_01105) treC 182715..184343 (+) 1629 WP_010922745.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=410722 GQ677_RS01095 WP_002992823.1 179700..180413(-) (treR) [Streptococcus pyogenes strain 1085]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=410722 GQ677_RS01095 WP_002992823.1 179700..180413(-) (treR) [Streptococcus pyogenes strain 1085]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment