Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   GE573_RS19650 Genome accession   NZ_CP047119
Coordinates   2259585..2259749 (+) Length   54 a.a.
NCBI ID   WP_269461319.1    Uniprot ID   -
Organism   Bacillus velezensis strain AK-0     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2254585..2264749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE573_RS19900 - 2257050..2257340 (+) 291 WP_352427002.1 hypothetical protein -
  GE573_RS19645 - 2257418..2259520 (+) 2103 Protein_2269 non-ribosomal peptide synthetase -
  GE573_RS19650 comS 2259585..2259749 (+) 165 WP_269461319.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6184.17 Da        Isoelectric Point: 12.0559

>NTDB_id=410714 GE573_RS19650 WP_269461319.1 2259585..2259749(+) (comS) [Bacillus velezensis strain AK-0]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRQARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=410714 GE573_RS19650 WP_269461319.1 2259585..2259749(+) (comS) [Bacillus velezensis strain AK-0]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCAAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

63.636

81.481

0.519

Multiple sequence alignment