Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   GE573_RS15475 Genome accession   NZ_CP047119
Coordinates   3012470..3013423 (+) Length   317 a.a.
NCBI ID   WP_060562152.1    Uniprot ID   -
Organism   Bacillus velezensis strain AK-0     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3007470..3018423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE573_RS15450 (GE573_03085) argF 3009288..3010259 (+) 972 WP_190664198.1 ornithine carbamoyltransferase -
  GE573_RS15455 (GE573_03086) - 3010335..3010514 (+) 180 WP_003155070.1 YjzC family protein -
  GE573_RS15460 (GE573_03087) - 3010551..3010736 (-) 186 WP_007409129.1 YjzD family protein -
  GE573_RS15465 (GE573_03088) - 3010997..3011731 (+) 735 WP_059367238.1 hypothetical protein -
  GE573_RS15470 (GE573_03089) - 3011814..3012380 (+) 567 WP_007409126.1 hypothetical protein -
  GE573_RS15475 (GE573_03090) med 3012470..3013423 (+) 954 WP_060562152.1 BMP family ABC transporter substrate-binding protein Regulator
  GE573_RS15480 (GE573_03091) comZ 3013436..3013627 (+) 192 WP_003155061.1 ComZ family protein Regulator
  GE573_RS15485 (GE573_03092) - 3013656..3013874 (-) 219 WP_007409123.1 hypothetical protein -
  GE573_RS15490 (GE573_03093) - 3014041..3014979 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  GE573_RS15495 (GE573_03094) fabF 3015002..3016240 (+) 1239 WP_012117277.1 beta-ketoacyl-ACP synthase II -
  GE573_RS15500 (GE573_03095) - 3016324..3017109 (+) 786 WP_061046904.1 DUF2268 domain-containing protein -
  GE573_RS15505 (GE573_03096) - 3017283..3018269 (+) 987 WP_160182559.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35328.92 Da        Isoelectric Point: 4.6067

>NTDB_id=410698 GE573_RS15475 WP_060562152.1 3012470..3013423(+) (med) [Bacillus velezensis strain AK-0]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYENPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=410698 GE573_RS15475 WP_060562152.1 3012470..3013423(+) (med) [Bacillus velezensis strain AK-0]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTAGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAACCCTGATATCACCGTCAACACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTGAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.864

100

0.789

Multiple sequence alignment