Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | FOC12_RS20900 | Genome accession | NZ_CP047111 |
| Coordinates | 4038407..4039450 (+) | Length | 347 a.a. |
| NCBI ID | WP_001013201.1 | Uniprot ID | A0A6L8PIF1 |
| Organism | Bacillus anthracis strain FDAARGOS_704 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4033407..4044450
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC12_RS20865 (FOC12_20875) | - | 4033662..4034150 (+) | 489 | WP_000764252.1 | hypothetical protein | - |
| FOC12_RS20870 (FOC12_20880) | - | 4034187..4034498 (-) | 312 | WP_001093245.1 | hypothetical protein | - |
| FOC12_RS20875 (FOC12_20885) | - | 4034751..4034966 (+) | 216 | WP_001008320.1 | DUF3912 family protein | - |
| FOC12_RS20880 (FOC12_20890) | - | 4035054..4035461 (+) | 408 | WP_000877909.1 | hypothetical protein | - |
| FOC12_RS20885 (FOC12_20895) | - | 4035636..4037030 (-) | 1395 | WP_001094329.1 | L-cystine transporter | - |
| FOC12_RS20890 (FOC12_20900) | - | 4037138..4037380 (-) | 243 | WP_000440708.1 | DUF2626 domain-containing protein | - |
| FOC12_RS20895 (FOC12_20905) | - | 4037506..4038201 (-) | 696 | WP_000434119.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| FOC12_RS20900 (FOC12_20910) | comGA | 4038407..4039450 (+) | 1044 | WP_001013201.1 | competence protein ComGA | Machinery gene |
| FOC12_RS20905 (FOC12_20915) | comGB | 4039443..4040474 (+) | 1032 | WP_000471910.1 | comG operon protein ComGB | - |
| FOC12_RS20910 (FOC12_20920) | comGC | 4040486..4040785 (+) | 300 | WP_001178688.1 | comG operon protein ComGC | - |
| FOC12_RS20915 (FOC12_20925) | comGD | 4040782..4041237 (+) | 456 | WP_000810395.1 | comG operon protein ComGD | - |
| FOC12_RS20920 (FOC12_20930) | comGE | 4041230..4041532 (+) | 303 | WP_000829456.1 | competence type IV pilus minor pilin ComGE | - |
| FOC12_RS20925 (FOC12_20935) | comGF | 4041502..4041972 (+) | 471 | WP_000923094.1 | competence type IV pilus minor pilin ComGF | - |
| FOC12_RS20930 (FOC12_20940) | comGG | 4041969..4042339 (+) | 371 | Protein_4116 | competence type IV pilus minor pilin ComGG | - |
| FOC12_RS20935 (FOC12_20945) | - | 4042515..4043165 (+) | 651 | WP_000183878.1 | 2OG-Fe(II) oxygenase | - |
| FOC12_RS20940 (FOC12_20950) | aroK | 4043286..4043783 (+) | 498 | WP_000836640.1 | shikimate kinase AroK | - |
| FOC12_RS20945 (FOC12_20955) | - | 4043822..4044022 (+) | 201 | WP_000106085.1 | YqzE family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39354.93 Da Isoelectric Point: 9.3530
>NTDB_id=410577 FOC12_RS20900 WP_001013201.1 4038407..4039450(+) (comGA) [Bacillus anthracis strain FDAARGOS_704]
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKYCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMGFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKYCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMGFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=410577 FOC12_RS20900 WP_001013201.1 4038407..4039450(+) (comGA) [Bacillus anthracis strain FDAARGOS_704]
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAATATTGTATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGTCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
GTTATTCTCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTCGGTTCATGGGTTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAATATTGTATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGTCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
GTTATTCTCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTCGGTTCATGGGTTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.925 |
100 |
0.579 |
| pilB | Vibrio campbellii strain DS40M4 |
35.977 |
100 |
0.366 |