Detailed information NTG0410561

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FOC12_RS14800
• Genome accession: NZ_CP047111
• Coordinates: 2868499..2869626 (-)
• Length: 375 a.a.
• NCBI ID: WP_000470753.1
• Uniprot ID: Q6I535
• Organism: Bacillus anthracis strain FDAARGOS_704
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2863499..2874626

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC12_RS14790 (FOC12_14800)	gyrA	2863978..2866449 (-)	2472	WP_159110768.1	DNA gyrase subunit A	-
FOC12_RS14795 (FOC12_14805)	gyrB	2866538..2868460 (-)	1923	WP_000435993.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
FOC12_RS14800 (FOC12_14810)	recF	2868499..2869626 (-)	1128	WP_000470753.1	DNA replication/repair protein RecF	Machinery gene
FOC12_RS14805 (FOC12_14815)	yaaA	2869639..2869851 (-)	213	WP_000821367.1	S4 domain-containing protein YaaA	-
FOC12_RS14810 (FOC12_14820)	dnaN	2869979..2871118 (-)	1140	WP_001212525.1	DNA polymerase III subunit beta	-
FOC12_RS14815 (FOC12_14825)	dnaA	2871297..2872637 (-)	1341	WP_000428021.1	chromosomal replication initiator protein DnaA	-
FOC12_RS14820 (FOC12_14830)	rpmH	2873202..2873336 (+)	135	WP_000831901.1	50S ribosomal protein L34	-
FOC12_RS14825 (FOC12_14835)	rnpA	2873413..2873772 (+)	360	WP_000726628.1	ribonuclease P protein component	-
FOC12_RS14830 (FOC12_14840)	spoIIIJ	2873812..2874579 (+)	768	WP_000727748.1	YidC family membrane integrase SpoIIIJ	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43362.71 Da
• Isoelectric Point: 6.9850

>NTDB_id=410561 FOC12_RS14800 WP_000470753.1 2868499..2869626(-) (recF) [Bacillus anthracis strain FDAARGOS_704]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILRKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=410561 FOC12_RS14800 WP_000470753.1 2868499..2869626(-) (recF) [Bacillus anthracis strain FDAARGOS_704]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAAGTAAATGT
AATTATCGGCGAGAACGCGCAAGGGAAAACGAATTTGATGGAAGCTATTTATGTTTTGGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGTGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGAAAGTTACAAAAGAGAAATAGTTCT
TTGTCTTTGGAATTAAATATCTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAATTGAGTCAATA
TATTGGCGTGATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGCCAAATAGCTCCGGTCTATTTGTATGAATTGAGTCAATATCAAAAGGTGCTCACACAACGA
AATCACTTGCTGAAAAAGATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTACAAAAATATTGCGAAAACGCTTTGAGTTTTTGCATTTACTACAAGAATGGGCAGCTCCAATTCATCGTGGTA
TAAGCCGTGGATTAGAAGAATTAGAAATTGTCTATAAACCGAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCAGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTGT
CCCTAAAATTAGCTGAAATTGAATTGATTTACTCAGAAGTTAAGGAATATCCGATTCTTTTACTCGATGATGTATTATCA
GAATTAGATGATTATCGTCAATCGCATCTGTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTGACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCGTAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: Q6I535

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.304	98.133	0.651