Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   H1R75_RS04170 Genome accession   NZ_CP059471
Coordinates   778841..779326 (+) Length   161 a.a.
NCBI ID   WP_021142040.1    Uniprot ID   -
Organism   Streptococcus equinus strain MDC1     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 773841..784326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1R75_RS04145 (H1R75_04145) - 774467..775255 (+) 789 WP_182001738.1 Nif3-like dinuclear metal center hexameric protein -
  H1R75_RS04150 (H1R75_04150) rfbA 775389..776258 (+) 870 WP_004231150.1 glucose-1-phosphate thymidylyltransferase RfbA -
  H1R75_RS04155 (H1R75_04155) - 776258..776854 (+) 597 WP_039698361.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  H1R75_RS04160 (H1R75_04160) rfbB 777082..778128 (+) 1047 WP_021142038.1 dTDP-glucose 4,6-dehydratase -
  H1R75_RS04165 (H1R75_04165) - 778267..778689 (+) 423 WP_182001739.1 HD domain-containing protein -
  H1R75_RS04170 (H1R75_04170) mutX 778841..779326 (+) 486 WP_021142040.1 NUDIX hydrolase Machinery gene
  H1R75_RS04175 (H1R75_04175) - 779363..780550 (+) 1188 WP_141347929.1 AI-2E family transporter -
  H1R75_RS04180 (H1R75_04180) - 780540..781775 (+) 1236 WP_021142042.1 tetratricopeptide repeat protein -
  H1R75_RS04185 (H1R75_04185) - 781759..781941 (+) 183 WP_021142043.1 hypothetical protein -
  H1R75_RS04190 (H1R75_04190) alsS 782196..783869 (+) 1674 WP_182001740.1 acetolactate synthase AlsS -

Sequence

Protein


Download         Length: 161 a.a.        Molecular weight: 18880.21 Da        Isoelectric Point: 4.3823

>NTDB_id=410464 H1R75_RS04170 WP_021142040.1 778841..779326(+) (mutX) [Streptococcus equinus strain MDC1]
MTKLATICYIDNGEALLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECAKREIFEETHFIVKEMDFKGVITFPEFTPGH
DWYTYVFKVTDFEGELISDEESREGTLEWVPYDKVLSKPTWEGDYEIFKWILDDVPFFSAKFTYDDQQRLVDKSVTFYDN
K

Nucleotide


Download         Length: 486 bp        

>NTDB_id=410464 H1R75_RS04170 WP_021142040.1 778841..779326(+) (mutX) [Streptococcus equinus strain MDC1]
ATGACAAAGTTAGCAACGATTTGTTATATTGATAATGGTGAGGCACTTTTGCTTTTGCACCGTAATAAAAAGCCAAATGA
TGTTCATGAAGGAAAATGGATTTCAGTTGGTGGTAAGCTTGAAGCAGGTGAGACTCCTGATGAATGTGCAAAGCGTGAAA
TTTTTGAAGAAACTCATTTTATCGTTAAAGAAATGGACTTTAAGGGAGTGATTACTTTCCCTGAATTTACACCTGGTCAT
GATTGGTACACTTATGTGTTTAAAGTGACTGATTTTGAGGGTGAGTTGATTTCTGATGAGGAATCACGTGAAGGAACATT
GGAATGGGTTCCTTATGATAAAGTTCTTTCAAAACCGACTTGGGAAGGTGATTACGAAATCTTTAAGTGGATTTTGGATG
ATGTTCCATTCTTTTCAGCTAAATTTACTTATGATGACCAACAACGTTTAGTTGATAAAAGTGTCACTTTCTATGATAAT
AAGTAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.811

98.758

0.689