Detailed information NTG0410403

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FOC08_RS01835
• Genome accession: NZ_CP047099
• Coordinates: 380922..382049 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470753.1
• Uniprot ID: Q6I535
• Organism: Bacillus anthracis strain FDAARGOS_700
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 375922..387049

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC08_RS01805 (FOC08_01805)	spoIIIJ	375969..376736 (-)	768	WP_000727748.1	YidC family membrane integrase SpoIIIJ	-
FOC08_RS01810 (FOC08_01810)	rnpA	376776..377135 (-)	360	WP_000726628.1	ribonuclease P protein component	-
FOC08_RS01815 (FOC08_01815)	rpmH	377212..377346 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
FOC08_RS01820 (FOC08_01820)	dnaA	377911..379251 (+)	1341	WP_000428021.1	chromosomal replication initiator protein DnaA	-
FOC08_RS01825 (FOC08_01825)	dnaN	379430..380569 (+)	1140	WP_001212525.1	DNA polymerase III subunit beta	-
FOC08_RS01830 (FOC08_01830)	yaaA	380697..380909 (+)	213	WP_000821367.1	S4 domain-containing protein YaaA	-
FOC08_RS01835 (FOC08_01835)	recF	380922..382049 (+)	1128	WP_000470753.1	DNA replication/repair protein RecF	Machinery gene
FOC08_RS01840 (FOC08_01840)	gyrB	382088..384010 (+)	1923	WP_000435993.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
FOC08_RS01845 (FOC08_01845)	gyrA	384099..386570 (+)	2472	WP_159110768.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43362.71 Da
• Isoelectric Point: 6.9850

>NTDB_id=410403 FOC08_RS01835 WP_000470753.1 380922..382049(+) (recF) [Bacillus anthracis strain FDAARGOS_700]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILRKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=410403 FOC08_RS01835 WP_000470753.1 380922..382049(+) (recF) [Bacillus anthracis strain FDAARGOS_700]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAAGTAAATGT
AATTATCGGCGAGAACGCGCAAGGGAAAACGAATTTGATGGAAGCTATTTATGTTTTGGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGTGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGAAAGTTACAAAAGAGAAATAGTTCT
TTGTCTTTGGAATTAAATATCTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAATTGAGTCAATA
TATTGGCGTGATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGCCAAATAGCTCCGGTCTATTTGTATGAATTGAGTCAATATCAAAAGGTGCTCACACAACGA
AATCACTTGCTGAAAAAGATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTACAAAAATATTGCGAAAACGCTTTGAGTTTTTGCATTTACTACAAGAATGGGCAGCTCCAATTCATCGTGGTA
TAAGCCGTGGATTAGAAGAATTAGAAATTGTCTATAAACCGAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCAGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTGT
CCCTAAAATTAGCTGAAATTGAATTGATTTACTCAGAAGTTAAGGAATATCCGATTCTTTTACTCGATGATGTATTATCA
GAATTAGATGATTATCGTCAATCGCATCTGTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTGACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCGTAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: Q6I535

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.304	98.133	0.651