Detailed information NTG0410372

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FOC09_RS12270
• Genome accession: NZ_CP047098
• Coordinates: 2387457..2388584 (-)
• Length: 375 a.a.
• NCBI ID: WP_000470753.1
• Uniprot ID: Q6I535
• Organism: Bacillus anthracis strain FDAARGOS_701
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2382457..2393584

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC09_RS12260 (FOC09_12270)	gyrA	2382936..2385407 (-)	2472	WP_159110768.1	DNA gyrase subunit A	-
FOC09_RS12265 (FOC09_12275)	gyrB	2385496..2387418 (-)	1923	WP_000435993.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
FOC09_RS12270 (FOC09_12280)	recF	2387457..2388584 (-)	1128	WP_000470753.1	DNA replication/repair protein RecF	Machinery gene
FOC09_RS12275 (FOC09_12285)	yaaA	2388597..2388809 (-)	213	WP_000821367.1	S4 domain-containing protein YaaA	-
FOC09_RS12280 (FOC09_12290)	dnaN	2388937..2390076 (-)	1140	WP_001212525.1	DNA polymerase III subunit beta	-
FOC09_RS12285 (FOC09_12295)	dnaA	2390255..2391595 (-)	1341	WP_000428021.1	chromosomal replication initiator protein DnaA	-
FOC09_RS12290 (FOC09_12300)	rpmH	2392160..2392294 (+)	135	WP_000831901.1	50S ribosomal protein L34	-
FOC09_RS12295 (FOC09_12305)	rnpA	2392371..2392730 (+)	360	WP_000726628.1	ribonuclease P protein component	-
FOC09_RS12300 (FOC09_12310)	spoIIIJ	2392770..2393537 (+)	768	WP_000727748.1	YidC family membrane integrase SpoIIIJ	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43362.71 Da
• Isoelectric Point: 6.9850

>NTDB_id=410372 FOC09_RS12270 WP_000470753.1 2387457..2388584(-) (recF) [Bacillus anthracis strain FDAARGOS_701]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILRKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=410372 FOC09_RS12270 WP_000470753.1 2387457..2388584(-) (recF) [Bacillus anthracis strain FDAARGOS_701]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAAGTAAATGT
AATTATCGGCGAGAACGCGCAAGGGAAAACGAATTTGATGGAAGCTATTTATGTTTTGGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGTGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGAAAGTTACAAAAGAGAAATAGTTCT
TTGTCTTTGGAATTAAATATCTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAATTGAGTCAATA
TATTGGCGTGATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGCCAAATAGCTCCGGTCTATTTGTATGAATTGAGTCAATATCAAAAGGTGCTCACACAACGA
AATCACTTGCTGAAAAAGATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTACAAAAATATTGCGAAAACGCTTTGAGTTTTTGCATTTACTACAAGAATGGGCAGCTCCAATTCATCGTGGTA
TAAGCCGTGGATTAGAAGAATTAGAAATTGTCTATAAACCGAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCAGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTGT
CCCTAAAATTAGCTGAAATTGAATTGATTTACTCAGAAGTTAAGGAATATCCGATTCTTTTACTCGATGATGTATTATCA
GAATTAGATGATTATCGTCAATCGCATCTGTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTGACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCGTAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: Q6I535

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.304	98.133	0.651