Detailed information
Bioinformatically predicted
Overview
| Name | recF | Type | Machinery gene |
| Locus tag | GQZ26_RS23235 | Genome accession | NZ_CP047085 |
| Coordinates | 4520997..4522124 (+) | Length | 375 a.a. |
| NCBI ID | WP_000470750.1 | Uniprot ID | A0A2C3GXQ0 |
| Organism | Bacillus paranthracis strain BC307 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 4515997..4527124
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQZ26_RS23205 (GQZ26_23190) | spoIIIJ | 4516043..4516810 (-) | 768 | WP_000727745.1 | YidC family membrane integrase SpoIIIJ | - |
| GQZ26_RS23210 (GQZ26_23195) | rnpA | 4516863..4517210 (-) | 348 | WP_000726629.1 | ribonuclease P protein component | - |
| GQZ26_RS23215 (GQZ26_23200) | rpmH | 4517287..4517421 (-) | 135 | WP_000831901.1 | 50S ribosomal protein L34 | - |
| GQZ26_RS23220 (GQZ26_23205) | dnaA | 4517987..4519326 (+) | 1340 | Protein_4691 | chromosomal replication initiator protein DnaA | - |
| GQZ26_RS23225 (GQZ26_23210) | dnaN | 4519505..4520644 (+) | 1140 | WP_001212896.1 | DNA polymerase III subunit beta | - |
| GQZ26_RS23230 (GQZ26_23215) | yaaA | 4520772..4520984 (+) | 213 | WP_000821367.1 | S4 domain-containing protein YaaA | - |
| GQZ26_RS23235 (GQZ26_23220) | recF | 4520997..4522124 (+) | 1128 | WP_000470750.1 | DNA replication/repair protein RecF | Machinery gene |
| GQZ26_RS23240 (GQZ26_23225) | gyrB | 4522163..4524085 (+) | 1923 | WP_000435993.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B | - |
| GQZ26_RS23245 (GQZ26_23230) | gyrA | 4524174..4526645 (+) | 2472 | WP_001282850.1 | DNA gyrase subunit A | - |
Sequence
Protein
Download Length: 375 a.a. Molecular weight: 43334.66 Da Isoelectric Point: 6.7809
>NTDB_id=410244 GQZ26_RS23235 WP_000470750.1 4520997..4522124(+) (recF) [Bacillus paranthracis strain BC307]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA
Nucleotide
Download Length: 1128 bp
>NTDB_id=410244 GQZ26_RS23235 WP_000470750.1 4520997..4522124(+) (recF) [Bacillus paranthracis strain BC307]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAGTTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAGAATGCGCAAGGGAAAACGAATTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGCGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGAAAGCTACAAAAGAGAAATAGTTCT
TTGTCTTTGGAATTAAATATCTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAATTGAGTCAATA
TATTGGCGTGATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGCCAAATAGCTCCGGTCTATTTGTATGAATTGAGTCAATATCAAAAGGTGCTCACACAACGA
AATCACTTGCTAAAAAAGATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTACAAAAATTTTGCAAAAACGCTTTGAATTTTTGCATTTACTACAAGAATGGGCAGCTCCAATTCATCGTGGTA
TAAGCCGTGGGTTAGAAGAATTAGAAATTGTCTATAAACCGAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCCGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTGT
CCCTAAAATTAGCTGAAATTGAATTGATTTACTCAGAAGTTAAAGAATATCCGATTCTTCTATTGGATGATGTATTATCA
GAATTAGATGATTATCGTCAATCGCATCTGTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTGACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCGTAA
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAGTTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAGAATGCGCAAGGGAAAACGAATTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGCGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGAAAGCTACAAAAGAGAAATAGTTCT
TTGTCTTTGGAATTAAATATCTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAATTGAGTCAATA
TATTGGCGTGATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGCCAAATAGCTCCGGTCTATTTGTATGAATTGAGTCAATATCAAAAGGTGCTCACACAACGA
AATCACTTGCTAAAAAAGATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTACAAAAATTTTGCAAAAACGCTTTGAATTTTTGCATTTACTACAAGAATGGGCAGCTCCAATTCATCGTGGTA
TAAGCCGTGGGTTAGAAGAATTAGAAATTGTCTATAAACCGAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCCGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTGT
CCCTAAAATTAGCTGAAATTGAATTGATTTACTCAGAAGTTAAAGAATATCCGATTCTTCTATTGGATGATGTATTATCA
GAATTAGATGATTATCGTCAATCGCATCTGTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTGACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recF | Bacillus subtilis subsp. subtilis str. 168 |
66.304 |
98.133 |
0.651 |