Detailed information NTG0410238

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: GQZ26_RS21705
• Genome accession: NZ_CP047085
• Coordinates: 4189415..4190764 (-)
• Length: 449 a.a.
• NCBI ID: WP_159109380.1
• Uniprot ID: -
• Organism: Bacillus paranthracis strain BC307
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4184415..4195764

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GQZ26_RS21685 (GQZ26_21670)	secA	4184741..4187248 (-)	2508	WP_000579382.1	preprotein translocase subunit SecA	-
GQZ26_RS21690 (GQZ26_21675)	hpf	4187524..4188066 (-)	543	WP_000671191.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
GQZ26_RS21695 (GQZ26_21680)	cspC	4188387..4188584 (-)	198	WP_001162041.1	cold shock protein CspC	-
GQZ26_RS21700 (GQZ26_21685)	-	4188711..4189415 (-)	705	WP_002028884.1	ComF family protein	-
GQZ26_RS21705 (GQZ26_21690)	comFA	4189415..4190764 (-)	1350	WP_159109380.1	ATP-dependent helicase ComFA	Machinery gene
GQZ26_RS21710 (GQZ26_21695)	-	4190891..4192348 (-)	1458	WP_000499503.1	NlpC/P60 family protein	-
GQZ26_RS21715 (GQZ26_21700)	-	4192496..4192810 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
GQZ26_RS21720 (GQZ26_21705)	-	4192984..4193826 (-)	843	WP_000844764.1	DegV family protein	-
GQZ26_RS21725 (GQZ26_21710)	-	4194066..4194701 (+)	636	WP_000926695.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51029.53 Da
• Isoelectric Point: 9.7406

>NTDB_id=410238 GQZ26_RS21705 WP_159109380.1 4189415..4190764(-) (comFA) [Bacillus paranthracis strain BC307]
MLGGKQLLLEELSSDLRRELSDLKKRGEVVCVQGITKNTSKYICQRCGNMEQRLFASFLCKRCGKACAYCRKCITMGRVS
ECAVLVRGIHERNGDRELNPLQWNGALSIGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELAPRLQEVFPSITVAALYGGSVDHKKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVRQAM
KEKAARIYLTATPDEKWKRNFRKGKQKGVIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMNLNKKYPIFL
FVPHVRYIEEISQLLKGLDNRIDGVHAEDSMRKEKVASFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVMYFHYGKTEAMVRAKKHIQSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=410238 GQZ26_RS21705 WP_159109380.1 4189415..4190764(-) (comFA) [Bacillus paranthracis strain BC307]
ATGCTTGGTGGAAAACAGTTGCTATTAGAAGAACTCTCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGAGGGG
AGAGGTTGTATGTGTACAAGGTATAACGAAGAATACTTCTAAATATATATGTCAGCGCTGCGGAAATATGGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCGGTAAAGCATGCGCGTATTGCCGGAAGTGTATCACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGAATTCATGAAAGAAACGGAGACAGGGAGCTAAATCCATTACAGTGGAATGGGGCTTT
ATCGATTGGTCAGGAGTTGGCGGCGCAAGGAGTTATAGAAGCGATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCGCTCCAAAAAGGAGAAAGAGTGTGTATCGCAACG
CCAAGGACGGACGTTGTACTGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCAAGTATAACTGTAGCTGCTTTATACGG
AGGGAGTGTAGATCATAAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTTAGGCAAGCAATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAATGGAAGCGTAATTTCAGAAAGGGGAAACAAAA
AGGTGTTATTGTGTCAGGACGATACCATCGTCACCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGCGTGTTACTACAATGGTTAAAAATGAACTTAAACAAAAAGTATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAAGTCAGTTGTTGAAAGGGTTGGATAATAGAATCGATGGCGTGCATGC
AGAAGATTCGATGAGAAAAGAAAAAGTAGCATCTTTCAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGAGCTGAAGAAGAAATTTTTTCAGAGAGTGCGCTCGTA
CAAATTGCAGGCCGAGCGGGGCGTAGTTTTGAAGAGCCATATGGTGAGGTTATGTATTTTCATTACGGTAAGACAGAGGC
AATGGTACGCGCGAAAAAACATATTCAAAGTATGAACAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

• Type III restriction enzyme, res subunit (ResIII) (110-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.632	93.096	0.49
comFA	Latilactobacillus sakei subsp. sakei 23K	40	90.2	0.361