Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | GQZ26_RS17010 | Genome accession | NZ_CP047085 |
| Coordinates | 3295987..3297030 (-) | Length | 347 a.a. |
| NCBI ID | WP_001013206.1 | Uniprot ID | - |
| Organism | Bacillus paranthracis strain BC307 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3290987..3302030
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQZ26_RS16965 (GQZ26_16950) | - | 3291415..3291615 (-) | 201 | WP_000106079.1 | YqzE family protein | - |
| GQZ26_RS16970 (GQZ26_16955) | aroK | 3291654..3292151 (-) | 498 | WP_000836625.1 | shikimate kinase AroK | - |
| GQZ26_RS16975 (GQZ26_16960) | - | 3292271..3292921 (-) | 651 | WP_000183848.1 | 2OG-Fe(II) oxygenase | - |
| GQZ26_RS16980 (GQZ26_16965) | comGG | 3293097..3293468 (-) | 372 | WP_000595194.1 | competence type IV pilus minor pilin ComGG | - |
| GQZ26_RS16985 (GQZ26_16970) | comGF | 3293465..3293935 (-) | 471 | WP_000923058.1 | competence type IV pilus minor pilin ComGF | - |
| GQZ26_RS16990 (GQZ26_16975) | comGE | 3293905..3294207 (-) | 303 | WP_000829518.1 | competence type IV pilus minor pilin ComGE | - |
| GQZ26_RS16995 (GQZ26_16980) | comGD | 3294200..3294655 (-) | 456 | WP_000810387.1 | comG operon protein ComGD | - |
| GQZ26_RS17000 (GQZ26_16985) | comGC | 3294652..3294951 (-) | 300 | WP_001178694.1 | competence type IV pilus major pilin ComGC | - |
| GQZ26_RS17005 (GQZ26_16990) | comGB | 3294963..3295994 (-) | 1032 | WP_000473553.1 | competence type IV pilus assembly protein ComGB | - |
| GQZ26_RS17010 (GQZ26_16995) | comGA | 3295987..3297030 (-) | 1044 | WP_001013206.1 | competence protein ComGA | Machinery gene |
| GQZ26_RS17015 (GQZ26_17000) | - | 3297236..3297931 (+) | 696 | WP_000434105.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GQZ26_RS17020 (GQZ26_17005) | - | 3298265..3299443 (+) | 1179 | WP_097648771.1 | tyrosine-type recombinase/integrase | - |
| GQZ26_RS17025 (GQZ26_17010) | - | 3299474..3301612 (+) | 2139 | WP_097648770.1 | tyrosine-type recombinase/integrase | - |
| GQZ26_RS17030 (GQZ26_17015) | - | 3301605..3302000 (+) | 396 | WP_010480749.1 | DUF6262 family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39361.84 Da Isoelectric Point: 9.1826
>NTDB_id=410227 GQZ26_RS17010 WP_001013206.1 3295987..3297030(-) (comGA) [Bacillus paranthracis strain BC307]
MNGIESFANTILKEACRVQASDLHIVPRKKDVVIQLRIGKDLMTKQYIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLHYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTVCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLESSLRKGYALGFLEEDVYV
MNGIESFANTILKEACRVQASDLHIVPRKKDVVIQLRIGKDLMTKQYIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLHYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTVCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLESSLRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=410227 GQZ26_RS17010 WP_001013206.1 3295987..3297030(-) (comGA) [Bacillus paranthracis strain BC307]
ATGAATGGAATTGAAAGCTTTGCGAATACGATTTTGAAAGAGGCGTGTAGGGTACAAGCTTCGGATTTACATATTGTGCC
CCGGAAGAAGGATGTAGTGATTCAACTACGCATAGGGAAAGATTTAATGACGAAACAATACATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCCATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAGGAAGTGTATTTACGTCTTTCCACGCTTCCAACTGTATATCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
ATTATTCCCATGGGTTACTCGTATTTACTGGACCGACTGGATCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGCCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCGGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTGG
GTGAAATTCGTGATGAAGAAACAGCAAAAATCGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACACTGCAT
ACGAATGATGCGAAAGGAGCAATACTTCGGTTTATGGACTTTGGCATAACAAGGCAAGAGATTGAACAATCTTTATTGGC
TATAGCTGCACAGCGACTTGTTGAATTGAAGTGTCCGTTTTGTAAAAGAAAGTGCTCAACTGTATGTAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACGTACAAGCATGAGACATTAGAGTCTTCGTTGCGAAAAGGATACGCTTTAGGATTTTTAGAAGAGGATGTTTATGT
TTAA
ATGAATGGAATTGAAAGCTTTGCGAATACGATTTTGAAAGAGGCGTGTAGGGTACAAGCTTCGGATTTACATATTGTGCC
CCGGAAGAAGGATGTAGTGATTCAACTACGCATAGGGAAAGATTTAATGACGAAACAATACATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCCATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAGGAAGTGTATTTACGTCTTTCCACGCTTCCAACTGTATATCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
ATTATTCCCATGGGTTACTCGTATTTACTGGACCGACTGGATCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGCCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCGGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTGG
GTGAAATTCGTGATGAAGAAACAGCAAAAATCGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACACTGCAT
ACGAATGATGCGAAAGGAGCAATACTTCGGTTTATGGACTTTGGCATAACAAGGCAAGAGATTGAACAATCTTTATTGGC
TATAGCTGCACAGCGACTTGTTGAATTGAAGTGTCCGTTTTGTAAAAGAAAGTGCTCAACTGTATGTAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACGTACAAGCATGAGACATTAGAGTCTTCGTTGCGAAAAGGATACGCTTTAGGATTTTTAGAAGAGGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.501 |
100 |
0.585 |
| pilB | Vibrio campbellii strain DS40M4 |
35.977 |
100 |
0.366 |