Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   GQZ26_RS16655 Genome accession   NZ_CP047085
Coordinates   3243316..3244110 (-) Length   264 a.a.
NCBI ID   WP_063246699.1    Uniprot ID   -
Organism   Bacillus paranthracis strain BC307     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3238316..3249110
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GQZ26_RS16630 (GQZ26_16615) yqiS 3238550..3239449 (-) 900 WP_000763079.1 phosphate butyryltransferase -
  GQZ26_RS16635 (GQZ26_16620) - 3239645..3241717 (-) 2073 WP_000811010.1 sigma-54-dependent Fis family transcriptional regulator -
  GQZ26_RS16640 (GQZ26_16625) - 3241854..3242087 (+) 234 WP_001190187.1 DUF2627 domain-containing protein -
  GQZ26_RS16645 (GQZ26_16630) - 3242137..3242865 (-) 729 WP_000172554.1 glycerophosphodiester phosphodiesterase -
  GQZ26_RS16650 (GQZ26_16635) - 3242916..3243062 (+) 147 WP_000803575.1 YycC family protein -
  GQZ26_RS16655 (GQZ26_16640) spo0A 3243316..3244110 (-) 795 WP_063246699.1 sporulation transcription factor Spo0A Regulator
  GQZ26_RS16660 (GQZ26_16645) spoIVB 3244398..3245696 (-) 1299 WP_002028467.1 SpoIVB peptidase -
  GQZ26_RS16665 (GQZ26_16650) recN 3245815..3247554 (-) 1740 WP_000947749.1 DNA repair protein RecN Machinery gene
  GQZ26_RS16670 (GQZ26_16655) argR 3247821..3248270 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29482.25 Da        Isoelectric Point: 7.4719

>NTDB_id=410225 GQZ26_RS16655 WP_063246699.1 3243316..3244110(-) (spo0A) [Bacillus paranthracis strain BC307]
MEKIKVCLVDDNKELVSMLESYVAAQEDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKVS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=410225 GQZ26_RS16655 WP_063246699.1 3243316..3244110(-) (spo0A) [Bacillus paranthracis strain BC307]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
GGATATGGAAGTAATTGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TATTAGATATTATTATGCCACATTTAGATGGGTTAGCTGTACTAGAGAAAATGCGCCATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCGTTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCGTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
GGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATCGATTCTATTTCGTCCTTATTCGGTTATACAGTATCTATGTCA
AAAGCAAAACCTACGAACTCTGAGTTCATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGTTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment