Detailed information
Bioinformatically predicted
Overview
| Name | recU | Type | Machinery gene |
| Locus tag | H1A19_RS01835 | Genome accession | NZ_CP059383 |
| Coordinates | 313820..314419 (-) | Length | 199 a.a. |
| NCBI ID | WP_000248792.1 | Uniprot ID | Q3K380 |
| Organism | Streptococcus agalactiae strain BJ01 | ||
| Function | plasmid transformation; homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 308820..319419
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1A19_RS01820 (H1A19_01820) | nadE | 309273..310094 (+) | 822 | WP_000174854.1 | ammonia-dependent NAD(+) synthetase | - |
| H1A19_RS01825 (H1A19_01825) | pepC | 310207..311541 (+) | 1335 | WP_000041114.1 | aminopeptidase C | - |
| H1A19_RS01830 (H1A19_01830) | pbp1a | 311587..313833 (-) | 2247 | WP_000628369.1 | penicillin-binding protein PBP1A | - |
| H1A19_RS01835 (H1A19_01835) | recU | 313820..314419 (-) | 600 | WP_000248792.1 | Holliday junction resolvase RecU | Machinery gene |
| H1A19_RS01840 (H1A19_01840) | - | 314494..315012 (+) | 519 | WP_000843096.1 | DUF1273 domain-containing protein | - |
| H1A19_RS01845 (H1A19_01845) | gpsB | 315133..315465 (+) | 333 | WP_000146544.1 | cell division regulator GpsB | - |
| H1A19_RS01855 (H1A19_01855) | - | 315935..317089 (+) | 1155 | WP_000664851.1 | class I SAM-dependent RNA methyltransferase | - |
| H1A19_RS01860 (H1A19_01860) | - | 317102..318565 (+) | 1464 | WP_001287870.1 | cell division site-positioning protein MapZ family protein | - |
| H1A19_RS01865 (H1A19_01865) | - | 318790..319272 (-) | 483 | WP_181576336.1 | S-ribosylhomocysteine lyase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 23101.69 Da Isoelectric Point: 9.8314
>NTDB_id=410168 H1A19_RS01835 WP_000248792.1 313820..314419(-) (recU) [Streptococcus agalactiae strain BJ01]
MVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDYYLSHELAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQA
STTDYSGVYKGYYIDFEAKETRQKTAMPMKNFHAHQIEHMANVLQQKGICFVLLHFSTLKETYLLPANELISFYQIDKGN
KSMPIDYIRKNGFFVKESAFPQVPYLDIIEEKLLGGDYN
MVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDYYLSHELAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQA
STTDYSGVYKGYYIDFEAKETRQKTAMPMKNFHAHQIEHMANVLQQKGICFVLLHFSTLKETYLLPANELISFYQIDKGN
KSMPIDYIRKNGFFVKESAFPQVPYLDIIEEKLLGGDYN
Nucleotide
Download Length: 600 bp
>NTDB_id=410168 H1A19_RS01835 WP_000248792.1 313820..314419(-) (recU) [Streptococcus agalactiae strain BJ01]
ATGGTTAACTATCCACATCAGCTTATTCGGAAAACAACAGTTACAAAATCAAAGAAAAAGAAAATCGATTTTGCCAACCG
TGGTATGTCATTTGAAGCTGCTATCAATGCAACCAATGACTACTATTTGTCTCACGAATTAGCTGTCATTCATAAGAAAC
CAACGCCAGTACAAATCGTCAAGGTAGATTATCCTAAACGTAGTCGTGCTAAGATTGTAGAAGCTTATTTTAGACAAGCT
TCTACTACTGATTATTCTGGTGTTTACAAAGGTTACTATATTGACTTTGAAGCCAAAGAAACCCGGCAGAAAACTGCTAT
GCCTATGAAAAATTTTCATGCTCACCAAATAGAGCACATGGCAAATGTATTACAGCAAAAAGGGATTTGCTTTGTCTTGC
TTCATTTTTCCACACTTAAGGAAACCTATCTACTCCCTGCTAATGAGTTAATTTCATTTTATCAGATTGATAAAGGCAAT
AAATCAATGCCTATTGATTATATCAGAAAAAATGGATTTTTCGTAAAGGAGAGTGCCTTTCCTCAAGTCCCTTACTTAGA
TATTATTGAAGAAAAATTATTAGGCGGTGATTACAATTAA
ATGGTTAACTATCCACATCAGCTTATTCGGAAAACAACAGTTACAAAATCAAAGAAAAAGAAAATCGATTTTGCCAACCG
TGGTATGTCATTTGAAGCTGCTATCAATGCAACCAATGACTACTATTTGTCTCACGAATTAGCTGTCATTCATAAGAAAC
CAACGCCAGTACAAATCGTCAAGGTAGATTATCCTAAACGTAGTCGTGCTAAGATTGTAGAAGCTTATTTTAGACAAGCT
TCTACTACTGATTATTCTGGTGTTTACAAAGGTTACTATATTGACTTTGAAGCCAAAGAAACCCGGCAGAAAACTGCTAT
GCCTATGAAAAATTTTCATGCTCACCAAATAGAGCACATGGCAAATGTATTACAGCAAAAAGGGATTTGCTTTGTCTTGC
TTCATTTTTCCACACTTAAGGAAACCTATCTACTCCCTGCTAATGAGTTAATTTCATTTTATCAGATTGATAAAGGCAAT
AAATCAATGCCTATTGATTATATCAGAAAAAATGGATTTTTCGTAAAGGAGAGTGCCTTTCCTCAAGTCCCTTACTTAGA
TATTATTGAAGAAAAATTATTAGGCGGTGATTACAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recU | Bacillus subtilis subsp. subtilis str. 168 |
48.223 |
98.995 |
0.477 |