Detailed information
Bioinformatically predicted
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | GQR97_RS06820 | Genome accession | NZ_CP047029 |
| Coordinates | 1589031..1590389 (-) | Length | 452 a.a. |
| NCBI ID | WP_158846759.1 | Uniprot ID | - |
| Organism | Algibacter sp. L1A34 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1584031..1595389
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQR97_RS06820 | radA | 1589031..1590389 (-) | 1359 | WP_158846759.1 | DNA repair protein RadA | Machinery gene |
| GQR97_RS06825 | - | 1590434..1591585 (-) | 1152 | WP_158846761.1 | alpha/beta hydrolase | - |
| GQR97_RS06830 | - | 1591660..1592631 (-) | 972 | WP_158846763.1 | lysylphosphatidylglycerol synthase transmembrane domain-containing protein | - |
| GQR97_RS06835 | panD | 1592636..1592986 (-) | 351 | WP_042499542.1 | aspartate 1-decarboxylase | - |
| GQR97_RS06840 | panC | 1593000..1593851 (-) | 852 | WP_158846765.1 | pantoate--beta-alanine ligase | - |
| GQR97_RS06845 | - | 1594014..1594823 (+) | 810 | WP_158846767.1 | glycogen/starch synthase | - |
Sequence
Protein
Download Length: 452 a.a. Molecular weight: 49805.23 Da Isoelectric Point: 7.5730
>NTDB_id=410005 GQR97_RS06820 WP_158846759.1 1589031..1590389(-) (radA) [Algibacter sp. L1A34]
MAKVKTTFFCQNCGTQYAKWQGQCNACKNWNTIVEEVVQKPEKSDWKTPTSSTKRASIPLRIKDIDSSKEARLDTFDGEF
NRVLGGGIVPGSLTLLGGEPGIGKSTLLLQISLKLPYKTLYVSGEESQKQIKMRAERVNPNNNNCYILTETKTQNIFKQI
EALEPDIVIIDSIQTLHSDYIESSSGSISQIKECTTELIKFAKETATPVLLIGHITKDGNIAGPKILEHMVDTVLQFEGD
RNHVFRILRANKNRFGSTNELGIYEMQGSGLREVTNPSEILISKKDEDLSGNAIAATLEGMRPLMIEVQALVSTAVYGTP
QRSATGFNAKRLNMLLAVLEKRAGFRLGAKDVFLNITGGITVDDPAIDLAVVASILSSNEDVALQKDFCFAAEVGLSGEI
RPVQRVEQRILEAEKLGFATIFVSKYNKISLKNTTIKIQLISKIEDLVSNLT
MAKVKTTFFCQNCGTQYAKWQGQCNACKNWNTIVEEVVQKPEKSDWKTPTSSTKRASIPLRIKDIDSSKEARLDTFDGEF
NRVLGGGIVPGSLTLLGGEPGIGKSTLLLQISLKLPYKTLYVSGEESQKQIKMRAERVNPNNNNCYILTETKTQNIFKQI
EALEPDIVIIDSIQTLHSDYIESSSGSISQIKECTTELIKFAKETATPVLLIGHITKDGNIAGPKILEHMVDTVLQFEGD
RNHVFRILRANKNRFGSTNELGIYEMQGSGLREVTNPSEILISKKDEDLSGNAIAATLEGMRPLMIEVQALVSTAVYGTP
QRSATGFNAKRLNMLLAVLEKRAGFRLGAKDVFLNITGGITVDDPAIDLAVVASILSSNEDVALQKDFCFAAEVGLSGEI
RPVQRVEQRILEAEKLGFATIFVSKYNKISLKNTTIKIQLISKIEDLVSNLT
Nucleotide
Download Length: 1359 bp
>NTDB_id=410005 GQR97_RS06820 WP_158846759.1 1589031..1590389(-) (radA) [Algibacter sp. L1A34]
ATGGCTAAAGTAAAAACCACTTTTTTTTGCCAGAACTGCGGCACGCAATACGCCAAATGGCAAGGGCAATGTAATGCCTG
TAAAAACTGGAACACCATAGTTGAAGAGGTAGTGCAAAAACCAGAAAAAAGTGATTGGAAAACACCGACATCCTCGACGA
AAAGAGCATCGATTCCATTAAGGATAAAAGATATAGATTCTTCTAAAGAAGCGCGACTAGATACTTTTGATGGTGAATTT
AATCGCGTTTTAGGAGGTGGTATTGTACCAGGGTCATTAACACTTTTAGGCGGTGAGCCAGGTATTGGAAAAAGCACACT
ACTACTTCAAATTTCATTAAAATTACCTTATAAAACTTTATATGTTTCAGGTGAAGAAAGCCAAAAACAAATAAAAATGC
GTGCAGAACGCGTTAACCCTAACAATAACAACTGCTACATTCTAACCGAAACTAAAACGCAAAACATATTTAAACAAATT
GAAGCTTTAGAGCCCGATATTGTTATAATAGATTCTATTCAAACCTTGCATAGCGATTATATCGAATCGTCTTCCGGAAG
TATTTCTCAAATAAAAGAATGTACAACCGAACTTATAAAATTTGCAAAAGAAACAGCAACACCCGTGTTATTAATTGGCC
ATATTACCAAAGACGGTAACATTGCAGGTCCAAAAATCTTAGAACACATGGTAGATACAGTTTTACAATTCGAAGGCGAC
CGAAATCATGTATTTAGAATTTTAAGAGCAAACAAAAACCGTTTTGGATCAACAAACGAATTAGGCATTTATGAAATGCA
AGGTTCTGGTCTGCGTGAAGTTACTAACCCAAGTGAAATTTTAATTTCTAAAAAAGACGAAGATTTATCAGGCAACGCCA
TTGCCGCAACACTTGAAGGCATGCGCCCGCTTATGATAGAGGTGCAAGCCTTAGTAAGCACAGCCGTTTATGGTACACCA
CAACGAAGCGCCACAGGCTTTAACGCCAAACGCTTAAACATGCTTTTAGCTGTTTTAGAGAAACGAGCAGGTTTCCGCCT
TGGCGCAAAAGATGTTTTTTTAAATATTACAGGAGGCATTACAGTAGATGATCCCGCAATAGATTTAGCCGTGGTTGCCT
CTATCCTGTCTTCTAATGAAGATGTCGCTCTACAAAAAGATTTTTGTTTTGCAGCCGAAGTTGGACTTTCTGGAGAAATC
CGTCCCGTTCAACGTGTTGAACAGCGTATTTTAGAAGCTGAAAAACTGGGATTCGCAACCATATTTGTATCTAAATACAA
TAAAATCTCTCTTAAAAATACAACGATTAAAATTCAGTTAATATCTAAAATTGAAGATTTAGTATCAAATTTGACTTAA
ATGGCTAAAGTAAAAACCACTTTTTTTTGCCAGAACTGCGGCACGCAATACGCCAAATGGCAAGGGCAATGTAATGCCTG
TAAAAACTGGAACACCATAGTTGAAGAGGTAGTGCAAAAACCAGAAAAAAGTGATTGGAAAACACCGACATCCTCGACGA
AAAGAGCATCGATTCCATTAAGGATAAAAGATATAGATTCTTCTAAAGAAGCGCGACTAGATACTTTTGATGGTGAATTT
AATCGCGTTTTAGGAGGTGGTATTGTACCAGGGTCATTAACACTTTTAGGCGGTGAGCCAGGTATTGGAAAAAGCACACT
ACTACTTCAAATTTCATTAAAATTACCTTATAAAACTTTATATGTTTCAGGTGAAGAAAGCCAAAAACAAATAAAAATGC
GTGCAGAACGCGTTAACCCTAACAATAACAACTGCTACATTCTAACCGAAACTAAAACGCAAAACATATTTAAACAAATT
GAAGCTTTAGAGCCCGATATTGTTATAATAGATTCTATTCAAACCTTGCATAGCGATTATATCGAATCGTCTTCCGGAAG
TATTTCTCAAATAAAAGAATGTACAACCGAACTTATAAAATTTGCAAAAGAAACAGCAACACCCGTGTTATTAATTGGCC
ATATTACCAAAGACGGTAACATTGCAGGTCCAAAAATCTTAGAACACATGGTAGATACAGTTTTACAATTCGAAGGCGAC
CGAAATCATGTATTTAGAATTTTAAGAGCAAACAAAAACCGTTTTGGATCAACAAACGAATTAGGCATTTATGAAATGCA
AGGTTCTGGTCTGCGTGAAGTTACTAACCCAAGTGAAATTTTAATTTCTAAAAAAGACGAAGATTTATCAGGCAACGCCA
TTGCCGCAACACTTGAAGGCATGCGCCCGCTTATGATAGAGGTGCAAGCCTTAGTAAGCACAGCCGTTTATGGTACACCA
CAACGAAGCGCCACAGGCTTTAACGCCAAACGCTTAAACATGCTTTTAGCTGTTTTAGAGAAACGAGCAGGTTTCCGCCT
TGGCGCAAAAGATGTTTTTTTAAATATTACAGGAGGCATTACAGTAGATGATCCCGCAATAGATTTAGCCGTGGTTGCCT
CTATCCTGTCTTCTAATGAAGATGTCGCTCTACAAAAAGATTTTTGTTTTGCAGCCGAAGTTGGACTTTCTGGAGAAATC
CGTCCCGTTCAACGTGTTGAACAGCGTATTTTAGAAGCTGAAAAACTGGGATTCGCAACCATATTTGTATCTAAATACAA
TAAAATCTCTCTTAAAAATACAACGATTAAAATTCAGTTAATATCTAAAATTGAAGATTTAGTATCAAATTTGACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Bacillus subtilis subsp. subtilis str. 168 |
50.698 |
95.133 |
0.482 |
| radA | Streptococcus mitis SK321 |
49.21 |
98.009 |
0.482 |
| radA | Streptococcus pneumoniae Rx1 |
50.117 |
94.469 |
0.473 |
| radA | Streptococcus pneumoniae D39 |
50.117 |
94.469 |
0.473 |
| radA | Streptococcus pneumoniae R6 |
50.117 |
94.469 |
0.473 |
| radA | Streptococcus pneumoniae TIGR4 |
50.117 |
94.469 |
0.473 |
| radA | Streptococcus mitis NCTC 12261 |
50.117 |
94.469 |
0.473 |