Detailed information NTG0409819

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: MS8320_RS19070
• Genome accession: NZ_CP059339
• Coordinates: 3871344..3872327 (-)
• Length: 327 a.a.
• NCBI ID: WP_001540025.1
• Uniprot ID: -
• Organism: Escherichia coli strain MS8320
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3866344..3877327

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MS8320_RS19045 (MS8320_3720)	bcsF	3866505..3866696 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
MS8320_RS19050 (MS8320_3721)	bcsG	3866693..3868372 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
MS8320_RS19055 (MS8320_3722)	ldrD	3868459..3868566 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MS8320_RS19060 (MS8320_3723)	yhjV	3869042..3870313 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
MS8320_RS19065 (MS8320_3724)	dppF	3870343..3871347 (-)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
MS8320_RS19070 (MS8320_3725)	amiE	3871344..3872327 (-)	984	WP_001540025.1	dipeptide ABC transporter ATP-binding protein	Regulator
MS8320_RS19075 (MS8320_3726)	dppC	3872338..3873240 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
MS8320_RS19080 (MS8320_3727)	dppB	3873250..3874269 (-)	1020	WP_001540029.1	dipeptide ABC transporter permease DppB	-
MS8320_RS19085	-	3874287..3874514 (+)	228	WP_000198576.1	hypothetical protein	-
MS8320_RS19090 (MS8320_3728)	dppA	3874576..3876183 (-)	1608	WP_001774075.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35792.37 Da
• Isoelectric Point: 6.4944

>NTDB_id=409819 MS8320_RS19070 WP_001540025.1 3871344..3872327(-) (amiE) [Escherichia coli strain MS8320]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFQAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=409819 MS8320_RS19070 WP_001540025.1 3871344..3872327(-) (amiE) [Escherichia coli strain MS8320]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCAGGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404