Detailed information NTG0409733

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: MS10860_RS19465
• Genome accession: NZ_CP059332
• Coordinates: 3939255..3940238 (-)
• Length: 327 a.a.
• NCBI ID: WP_001540025.1
• Uniprot ID: -
• Organism: Escherichia coli strain MS10860
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3934255..3945238

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MS10860_RS19440 (MS10860_3798)	bcsF	3934416..3934607 (+)	192	WP_077572268.1	cellulose biosynthesis protein BcsF	-
MS10860_RS19445 (MS10860_3799)	bcsG	3934604..3936283 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
MS10860_RS19450 (MS10860_3800)	ldrD	3936370..3936477 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MS10860_RS19455 (MS10860_3801)	yhjV	3936953..3938224 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
MS10860_RS19460 (MS10860_3802)	dppF	3938254..3939258 (-)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
MS10860_RS19465 (MS10860_3803)	amiE	3939255..3940238 (-)	984	WP_001540025.1	dipeptide ABC transporter ATP-binding protein	Regulator
MS10860_RS19470 (MS10860_3804)	dppC	3940249..3941151 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
MS10860_RS19475 (MS10860_3805)	dppB	3941161..3942180 (-)	1020	WP_001540029.1	dipeptide ABC transporter permease DppB	-
MS10860_RS19480 (MS10860_3806)	dppA	3942487..3944094 (-)	1608	WP_001774075.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35792.37 Da
• Isoelectric Point: 6.4944

>NTDB_id=409733 MS10860_RS19465 WP_001540025.1 3939255..3940238(-) (amiE) [Escherichia coli strain MS10860]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFQAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=409733 MS10860_RS19465 WP_001540025.1 3939255..3940238(-) (amiE) [Escherichia coli strain MS10860]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCAGGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404