Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ERJ70_RS13755 Genome accession   NZ_CP046956
Coordinates   2736241..2737191 (-) Length   316 a.a.
NCBI ID   WP_209365394.1    Uniprot ID   -
Organism   Sediminibacillus dalangtanensis strain DP4-553-S     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2731241..2742191
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ERJ70_RS13735 (ERJ70_13645) - 2732408..2732914 (-) 507 WP_209365390.1 chemotaxis protein CheX -
  ERJ70_RS13740 (ERJ70_13650) - 2733389..2734345 (-) 957 WP_209365391.1 siderophore ABC transporter substrate-binding protein -
  ERJ70_RS13745 (ERJ70_13655) - 2734546..2735304 (-) 759 WP_209365392.1 ABC transporter ATP-binding protein -
  ERJ70_RS13750 (ERJ70_13660) - 2735298..2736212 (-) 915 WP_374099817.1 iron chelate uptake ABC transporter family permease subunit -
  ERJ70_RS13755 (ERJ70_13665) ceuB 2736241..2737191 (-) 951 WP_209365394.1 ABC transporter permease Machinery gene
  ERJ70_RS13760 (ERJ70_13670) - 2737706..2737951 (-) 246 WP_209365395.1 glutaredoxin domain-containing protein -
  ERJ70_RS13765 (ERJ70_13675) - 2738200..2739342 (+) 1143 WP_209365396.1 conserved virulence factor C family protein -
  ERJ70_RS13770 (ERJ70_13680) - 2739355..2739783 (+) 429 WP_209365397.1 BrxA/BrxB family bacilliredoxin -
  ERJ70_RS13775 (ERJ70_13685) - 2740084..2740338 (-) 255 WP_209365398.1 alpha/beta-type small acid-soluble spore protein -
  ERJ70_RS13780 (ERJ70_13690) - 2740357..2740590 (-) 234 WP_209365399.1 YozQ family protein -
  ERJ70_RS13785 (ERJ70_13695) - 2740614..2740877 (-) 264 WP_209365400.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34741.87 Da        Isoelectric Point: 9.7536

>NTDB_id=409693 ERJ70_RS13755 WP_209365394.1 2736241..2737191(-) (ceuB) [Sediminibacillus dalangtanensis strain DP4-553-S]
MKLRYLALALLVLSFASLFIGVTSLSPSDIFHLTGDQLEILWVSRIPRLISILIAGMGMSICGLIMQQLSRNKFVSPTTA
GTIDSARFGILMSLMLFSSAGPLQKMMVAFFFALLGTFIFMKILDKVKFKDAIFIPLVGLMFGNIVSSITTFFAYKEDLI
QNMSSWLQGNFALIMQGRYEILFISIPLLAIAYLYANRFTIAGMGEEFSTNLGLNHKQVVNIGLVIVALVTTVVVLTVGM
IPFLGLIIPNIVTIYQGDHLKKSLTHTALLGAVFVLACDVIGRVIIYPYEIAIGVTVGVIGSGIFLYLVLRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=409693 ERJ70_RS13755 WP_209365394.1 2736241..2737191(-) (ceuB) [Sediminibacillus dalangtanensis strain DP4-553-S]
ATGAAGTTACGTTATTTGGCACTGGCATTACTCGTATTATCTTTCGCGTCATTATTCATCGGAGTGACAAGCTTGTCACC
TTCCGATATATTTCATCTCACAGGAGACCAGCTGGAGATTTTGTGGGTGAGCAGGATACCAAGGCTTATCAGTATATTGA
TTGCCGGAATGGGAATGAGCATATGCGGTTTGATTATGCAGCAGCTGAGCAGAAACAAATTTGTCTCTCCTACTACGGCT
GGAACTATTGATTCGGCCAGGTTCGGCATTCTGATGTCGTTGATGCTGTTTTCTTCAGCAGGACCATTGCAAAAGATGAT
GGTTGCTTTTTTCTTTGCTTTGTTGGGAACCTTTATTTTTATGAAAATTCTCGACAAGGTAAAATTCAAAGATGCCATCT
TCATTCCACTCGTTGGATTGATGTTCGGCAATATTGTCAGCTCGATCACTACTTTTTTTGCATATAAAGAGGATTTGATT
CAAAACATGTCATCCTGGCTGCAAGGCAATTTCGCCTTGATTATGCAGGGGAGATACGAAATATTGTTTATCAGTATTCC
ATTGCTGGCTATTGCTTACCTTTACGCCAATCGCTTTACGATAGCCGGTATGGGCGAGGAGTTTTCAACCAACTTGGGGT
TGAACCATAAACAAGTTGTCAATATCGGTTTGGTGATAGTCGCACTGGTAACTACGGTAGTCGTTCTGACTGTCGGAATG
ATTCCTTTTCTGGGTTTGATCATTCCGAATATCGTTACTATTTATCAGGGAGACCATCTGAAAAAAAGCCTTACTCATAC
TGCTTTACTAGGTGCCGTATTTGTTCTTGCCTGTGATGTGATCGGCAGGGTGATCATTTATCCCTATGAAATTGCCATCG
GTGTCACCGTCGGCGTAATCGGCAGCGGGATTTTTCTATACCTGGTATTGAGGAGAAAAGCATATGAGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.747

100

0.547

Multiple sequence alignment