Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | GPZ88_RS07130 | Genome accession | NZ_CP046919 |
| Coordinates | 1376917..1379202 (-) | Length | 761 a.a. |
| NCBI ID | WP_074563274.1 | Uniprot ID | - |
| Organism | Streptococcus ruminicola strain CNU_G2 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1371917..1384202
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPZ88_RS07110 (GPZ88_07090) | - | 1371931..1372689 (+) | 759 | WP_074559481.1 | DivIVA domain-containing protein | - |
| GPZ88_RS07115 (GPZ88_07095) | ileS | 1373014..1375812 (+) | 2799 | WP_166043829.1 | isoleucine--tRNA ligase | - |
| GPZ88_RS07120 (GPZ88_07100) | - | 1375901..1376203 (-) | 303 | WP_020916381.1 | DUF1827 family protein | - |
| GPZ88_RS07125 (GPZ88_07105) | - | 1376275..1376721 (-) | 447 | WP_158913312.1 | NUDIX hydrolase | - |
| GPZ88_RS07130 (GPZ88_07110) | clpE | 1376917..1379202 (-) | 2286 | WP_074563274.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| GPZ88_RS07135 (GPZ88_07115) | - | 1379342..1379875 (-) | 534 | WP_158913314.1 | DUF3278 domain-containing protein | - |
| GPZ88_RS07140 (GPZ88_07120) | - | 1379905..1380102 (-) | 198 | WP_039697275.1 | helix-turn-helix transcriptional regulator | - |
| GPZ88_RS07145 (GPZ88_07125) | argF | 1380277..1381257 (+) | 981 | WP_157629488.1 | ornithine carbamoyltransferase | - |
| GPZ88_RS07150 (GPZ88_07130) | - | 1381374..1381604 (+) | 231 | WP_004230761.1 | DUF1797 family protein | - |
| GPZ88_RS07155 (GPZ88_07135) | - | 1381915..1382601 (+) | 687 | WP_157628799.1 | amino acid ABC transporter permease | - |
| GPZ88_RS07160 (GPZ88_07140) | - | 1382601..1383335 (+) | 735 | WP_006531536.1 | amino acid ABC transporter ATP-binding protein | - |
| GPZ88_RS07165 (GPZ88_07145) | - | 1383700..1384176 (+) | 477 | WP_014334426.1 | FeoA family protein | - |
Sequence
Protein
Download Length: 761 a.a. Molecular weight: 84508.51 Da Isoelectric Point: 4.9828
>NTDB_id=409447 GPZ88_RS07130 WP_074563274.1 1376917..1379202(-) (clpE) [Streptococcus ruminicola strain CNU_G2]
MLCQNCHLNESTIHLYTNVNGQQKQIDLCQNCYQIMKTDPNNAILGGLGGNPQSSSNQTNQSSNPFDDFFSNLSGFPAFG
SQGFQNTPPTQSGGGNNNGRGGNGNNNFRPNGPAQQEPKGLLEEFGINVTDIARRGDIDPVIGRDAEIVRVIEILNRRTK
NNPVLIGEPGVGKTAVVEGLAQKIVDGNVPQKLQNKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRERKDVILFIDEI
HEIVGAGNAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILRGIQKKYEDY
HHVKYSDDAIEAAATLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDKRLVQAENLKTQATREEDYERAAYFR
DQIAKYKEMQKQTINEDDIPVITEKTIEAIVEEKTNIPVGDLKEKEQSQLIHLADDLKEHVIGQDEAVDKIAKAIRRNRV
GLGTPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRN
PYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKSEASVGFGAAREGRTNSVLGQLGDF
FSPEFMNRFDGIIEFKALSKDNLLHIVNLMLDDVNNRLATNDIHLEVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDA
ITDFYLEHPTEKDLKAVMTSNGKIIIKSAKKVEKEETVSAE
MLCQNCHLNESTIHLYTNVNGQQKQIDLCQNCYQIMKTDPNNAILGGLGGNPQSSSNQTNQSSNPFDDFFSNLSGFPAFG
SQGFQNTPPTQSGGGNNNGRGGNGNNNFRPNGPAQQEPKGLLEEFGINVTDIARRGDIDPVIGRDAEIVRVIEILNRRTK
NNPVLIGEPGVGKTAVVEGLAQKIVDGNVPQKLQNKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRERKDVILFIDEI
HEIVGAGNAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILRGIQKKYEDY
HHVKYSDDAIEAAATLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDKRLVQAENLKTQATREEDYERAAYFR
DQIAKYKEMQKQTINEDDIPVITEKTIEAIVEEKTNIPVGDLKEKEQSQLIHLADDLKEHVIGQDEAVDKIAKAIRRNRV
GLGTPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRN
PYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKSEASVGFGAAREGRTNSVLGQLGDF
FSPEFMNRFDGIIEFKALSKDNLLHIVNLMLDDVNNRLATNDIHLEVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDA
ITDFYLEHPTEKDLKAVMTSNGKIIIKSAKKVEKEETVSAE
Nucleotide
Download Length: 2286 bp
>NTDB_id=409447 GPZ88_RS07130 WP_074563274.1 1376917..1379202(-) (clpE) [Streptococcus ruminicola strain CNU_G2]
ATGCTCTGTCAAAATTGTCATTTAAATGAATCTACTATTCACCTGTATACAAATGTCAATGGTCAGCAAAAGCAAATTGA
TTTGTGTCAAAATTGCTATCAAATTATGAAAACTGACCCAAATAACGCTATTTTAGGAGGATTAGGAGGTAATCCTCAAT
CATCTTCTAACCAAACAAACCAATCATCGAATCCTTTCGACGATTTCTTTAGTAATCTCAGCGGCTTCCCAGCATTTGGA
AGCCAAGGATTCCAAAATACTCCTCCAACTCAATCTGGTGGAGGCAATAATAACGGACGCGGTGGCAATGGCAACAACAA
TTTCCGCCCAAACGGACCAGCACAGCAAGAACCTAAGGGCTTGCTAGAAGAATTTGGTATCAATGTTACTGATATCGCAC
GTCGTGGTGATATCGACCCTGTCATCGGACGTGATGCTGAAATTGTTCGTGTTATCGAAATTCTTAACCGCCGTACAAAA
AACAATCCTGTTCTTATCGGAGAACCTGGTGTTGGTAAAACTGCCGTTGTTGAAGGATTAGCCCAAAAAATTGTAGACGG
TAACGTTCCACAAAAACTCCAAAATAAACAAGTTATCCGCCTAGACGTGGTAAGCCTTGTTCAAGGAACTGGTATTCGTG
GTCAATTTGAAGAACGTATGCAAAAACTCATGGAAGAAATCCGTGAACGTAAAGATGTTATCCTCTTCATCGATGAAATC
CACGAAATTGTCGGCGCTGGTAATGCTGGTGACGGTAACATGGATGCTGGTAACATCTTGAAACCCGCTCTTGCTCGTGG
CGAGCTACAATTGGTTGGTGCAACTACTCTCAATGAATACCGTATCATCGAAAAAGATGCTGCGCTTGAACGTCGTATGC
AACCTGTAAAAGTTGACGAACCAAGCGTCGAAGAAACTATCACTATTCTTCGTGGTATTCAAAAGAAATACGAAGATTAT
CACCATGTCAAATACAGTGATGATGCTATCGAAGCTGCTGCTACCCTTTCAAATCGCTACATTCAAGACCGTTTCCTTCC
AGATAAAGCTATTGACCTTCTCGATGAAGCGGGTTCTAAGATGAACTTGACACTCAACTTTGTTGATCCAAAAGAAATTG
ACAAACGTTTAGTTCAAGCAGAAAACCTAAAAACTCAAGCTACTCGTGAAGAAGATTATGAACGCGCAGCATATTTCCGT
GATCAAATCGCTAAATACAAGGAAATGCAAAAACAAACCATCAACGAAGATGATATTCCAGTGATTACTGAGAAAACTAT
CGAAGCAATCGTTGAAGAAAAAACAAACATCCCTGTTGGTGACTTAAAAGAAAAAGAACAATCACAATTAATTCACCTTG
CTGATGACTTGAAAGAACACGTTATTGGTCAAGATGAAGCCGTTGATAAGATTGCCAAAGCTATCCGTCGTAACCGTGTT
GGTCTTGGTACACCAAACCGTCCAATTGGTTCATTCCTCTTTGTCGGTCCTACTGGTGTTGGTAAAACTGAACTTTCAAA
ACAACTCGCTATTGAACTCTTCGGTTCAGCTGATAGCATGATTCGCTTTGACATGTCTGAATACATGGAAAAACACGCCG
TCGCTAAACTCGTCGGAGCCCCTCCAGGATATGTTGGTTACGAAGAAGCTGGTCAGTTGACTGAAAAAGTTCGTCGAAAT
CCATACTCACTCATCTTGCTTGATGAAGTTGAAAAAGCACACCCTGATGTCATGCACATGTTCTTGCAAGTTCTTGACGA
TGGGCGTTTAACTGACGGTCAAGGACGCACTGTAAGCTTTAAAGATACAATTATCATCATGACATCTAACGCTGGTACTG
GCAAATCTGAAGCTTCTGTTGGTTTCGGTGCTGCTCGTGAAGGACGTACAAATTCTGTTCTTGGTCAACTTGGAGACTTC
TTCAGCCCTGAATTCATGAACCGTTTTGACGGCATTATCGAATTCAAAGCACTAAGCAAAGATAATCTCCTTCATATCGT
TAACCTCATGCTTGACGATGTTAACAACCGTTTGGCAACTAACGATATTCACCTTGAAGTAACAGACAAAGTTAAAGAAA
AACTAGTTGACCTTGGATATGATCCTAAGATGGGCGCTCGTCCACTTCGTCGAACTATCCAAGATCACATTGAAGATGCT
ATTACAGACTTCTACCTTGAACACCCAACTGAAAAAGATTTAAAAGCTGTGATGACAAGCAATGGTAAAATCATCATCAA
ATCAGCTAAAAAAGTTGAAAAAGAAGAAACTGTTTCAGCAGAATAA
ATGCTCTGTCAAAATTGTCATTTAAATGAATCTACTATTCACCTGTATACAAATGTCAATGGTCAGCAAAAGCAAATTGA
TTTGTGTCAAAATTGCTATCAAATTATGAAAACTGACCCAAATAACGCTATTTTAGGAGGATTAGGAGGTAATCCTCAAT
CATCTTCTAACCAAACAAACCAATCATCGAATCCTTTCGACGATTTCTTTAGTAATCTCAGCGGCTTCCCAGCATTTGGA
AGCCAAGGATTCCAAAATACTCCTCCAACTCAATCTGGTGGAGGCAATAATAACGGACGCGGTGGCAATGGCAACAACAA
TTTCCGCCCAAACGGACCAGCACAGCAAGAACCTAAGGGCTTGCTAGAAGAATTTGGTATCAATGTTACTGATATCGCAC
GTCGTGGTGATATCGACCCTGTCATCGGACGTGATGCTGAAATTGTTCGTGTTATCGAAATTCTTAACCGCCGTACAAAA
AACAATCCTGTTCTTATCGGAGAACCTGGTGTTGGTAAAACTGCCGTTGTTGAAGGATTAGCCCAAAAAATTGTAGACGG
TAACGTTCCACAAAAACTCCAAAATAAACAAGTTATCCGCCTAGACGTGGTAAGCCTTGTTCAAGGAACTGGTATTCGTG
GTCAATTTGAAGAACGTATGCAAAAACTCATGGAAGAAATCCGTGAACGTAAAGATGTTATCCTCTTCATCGATGAAATC
CACGAAATTGTCGGCGCTGGTAATGCTGGTGACGGTAACATGGATGCTGGTAACATCTTGAAACCCGCTCTTGCTCGTGG
CGAGCTACAATTGGTTGGTGCAACTACTCTCAATGAATACCGTATCATCGAAAAAGATGCTGCGCTTGAACGTCGTATGC
AACCTGTAAAAGTTGACGAACCAAGCGTCGAAGAAACTATCACTATTCTTCGTGGTATTCAAAAGAAATACGAAGATTAT
CACCATGTCAAATACAGTGATGATGCTATCGAAGCTGCTGCTACCCTTTCAAATCGCTACATTCAAGACCGTTTCCTTCC
AGATAAAGCTATTGACCTTCTCGATGAAGCGGGTTCTAAGATGAACTTGACACTCAACTTTGTTGATCCAAAAGAAATTG
ACAAACGTTTAGTTCAAGCAGAAAACCTAAAAACTCAAGCTACTCGTGAAGAAGATTATGAACGCGCAGCATATTTCCGT
GATCAAATCGCTAAATACAAGGAAATGCAAAAACAAACCATCAACGAAGATGATATTCCAGTGATTACTGAGAAAACTAT
CGAAGCAATCGTTGAAGAAAAAACAAACATCCCTGTTGGTGACTTAAAAGAAAAAGAACAATCACAATTAATTCACCTTG
CTGATGACTTGAAAGAACACGTTATTGGTCAAGATGAAGCCGTTGATAAGATTGCCAAAGCTATCCGTCGTAACCGTGTT
GGTCTTGGTACACCAAACCGTCCAATTGGTTCATTCCTCTTTGTCGGTCCTACTGGTGTTGGTAAAACTGAACTTTCAAA
ACAACTCGCTATTGAACTCTTCGGTTCAGCTGATAGCATGATTCGCTTTGACATGTCTGAATACATGGAAAAACACGCCG
TCGCTAAACTCGTCGGAGCCCCTCCAGGATATGTTGGTTACGAAGAAGCTGGTCAGTTGACTGAAAAAGTTCGTCGAAAT
CCATACTCACTCATCTTGCTTGATGAAGTTGAAAAAGCACACCCTGATGTCATGCACATGTTCTTGCAAGTTCTTGACGA
TGGGCGTTTAACTGACGGTCAAGGACGCACTGTAAGCTTTAAAGATACAATTATCATCATGACATCTAACGCTGGTACTG
GCAAATCTGAAGCTTCTGTTGGTTTCGGTGCTGCTCGTGAAGGACGTACAAATTCTGTTCTTGGTCAACTTGGAGACTTC
TTCAGCCCTGAATTCATGAACCGTTTTGACGGCATTATCGAATTCAAAGCACTAAGCAAAGATAATCTCCTTCATATCGT
TAACCTCATGCTTGACGATGTTAACAACCGTTTGGCAACTAACGATATTCACCTTGAAGTAACAGACAAAGTTAAAGAAA
AACTAGTTGACCTTGGATATGATCCTAAGATGGGCGCTCGTCCACTTCGTCGAACTATCCAAGATCACATTGAAGATGCT
ATTACAGACTTCTACCTTGAACACCCAACTGAAAAAGATTTAAAAGCTGTGATGACAAGCAATGGTAAAATCATCATCAA
ATCAGCTAAAAAAGTTGAAAAAGAAGAAACTGTTTCAGCAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
85.279 |
99.08 |
0.845 |
| clpE | Streptococcus pneumoniae Rx1 |
83.4 |
98.949 |
0.825 |
| clpE | Streptococcus pneumoniae D39 |
83.4 |
98.949 |
0.825 |
| clpE | Streptococcus pneumoniae R6 |
83.4 |
98.949 |
0.825 |
| clpE | Streptococcus pneumoniae TIGR4 |
83.4 |
98.949 |
0.825 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
77.135 |
100 |
0.771 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
51.108 |
88.962 |
0.455 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.402 |
83.443 |
0.396 |
| clpC | Streptococcus pneumoniae Rx1 |
46.741 |
82.654 |
0.386 |
| clpC | Streptococcus pneumoniae D39 |
46.741 |
82.654 |
0.386 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.582 |
82.654 |
0.385 |
| clpC | Streptococcus mutans UA159 |
47.021 |
81.603 |
0.384 |
| clpC | Streptococcus thermophilus LMD-9 |
45.298 |
83.837 |
0.38 |
| clpC | Streptococcus thermophilus LMG 18311 |
44.984 |
83.837 |
0.377 |