Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   GPZ88_RS06350 Genome accession   NZ_CP046919
Coordinates   1226388..1227113 (+) Length   241 a.a.
NCBI ID   WP_166043738.1    Uniprot ID   A0A6G8I0X0
Organism   Streptococcus ruminicola strain CNU_G2     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1221388..1232113
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPZ88_RS06320 (GPZ88_06300) - 1221788..1223209 (+) 1422 WP_039695970.1 NCS2 family permease -
  GPZ88_RS06325 (GPZ88_06305) tsaE 1223385..1223828 (+) 444 WP_074561333.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  GPZ88_RS06330 (GPZ88_06310) - 1223821..1224333 (+) 513 WP_074565147.1 GNAT family N-acetyltransferase -
  GPZ88_RS06335 (GPZ88_06315) brpA 1224344..1225516 (+) 1173 WP_166043736.1 biofilm formation/cell division transcriptional regulator BrpA -
  GPZ88_RS06340 (GPZ88_06320) - 1225603..1225908 (-) 306 WP_074603720.1 hypothetical protein -
  GPZ88_RS06345 (GPZ88_06325) - 1225905..1226324 (-) 420 WP_074565143.1 HIT family protein -
  GPZ88_RS06350 (GPZ88_06330) pptA 1226388..1227113 (+) 726 WP_166043738.1 ABC transporter ATP-binding protein Regulator
  GPZ88_RS06355 (GPZ88_06335) - 1227116..1228150 (+) 1035 WP_157628740.1 ABC transporter permease -
  GPZ88_RS06360 (GPZ88_06340) ccrZ 1228203..1229024 (+) 822 WP_158913196.1 cell cycle regulator CcrZ -
  GPZ88_RS06365 (GPZ88_06345) trmB 1229024..1229662 (+) 639 WP_021141720.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  GPZ88_RS06375 (GPZ88_06355) - 1230094..1231029 (+) 936 Protein_1197 hypothetical protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26779.17 Da        Isoelectric Point: 4.7909

>NTDB_id=409441 GPZ88_RS06350 WP_166043738.1 1226388..1227113(+) (pptA) [Streptococcus ruminicola strain CNU_G2]
MLKIENVTGGYINIPVLKNISFEVGDGELVGLIGLNGAGKSTTINEVIGLLTPYQGKITLDGLTLADNQAEYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLDFDEAMARAKELLKLFRLSDKLEWFPINFSKGMKQKVMIVCAFMIDPHLFIVDEPF
LGLDPLAISDLTDLLAQEKSKGKAILMSTHVLDAAEKMCDRFVILHHGQVRAMGNLAELRQAFGKEDASLNDIYMALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=409441 GPZ88_RS06350 WP_166043738.1 1226388..1227113(+) (pptA) [Streptococcus ruminicola strain CNU_G2]
ATGTTAAAAATTGAAAATGTCACAGGTGGATACATTAATATCCCTGTTTTAAAAAATATTTCTTTTGAAGTTGGTGACGG
TGAGTTGGTCGGCTTGATTGGGCTAAATGGTGCTGGGAAATCAACGACGATTAATGAAGTTATCGGACTTTTGACACCTT
ATCAAGGAAAGATTACGCTTGACGGCTTGACTTTGGCTGATAACCAAGCAGAGTATCGCAAAAAGATTGGCTTTATTCCT
GAAACGCCAAGCTTGTATGAAGAGTTAACTTTACGTGAGCATTTAGAGACGGTTGCTATGGCTTATGACCTTGATTTTGA
TGAGGCGATGGCGCGTGCAAAGGAATTGCTAAAACTTTTCCGTTTGTCTGATAAGCTTGAGTGGTTCCCGATTAATTTTT
CAAAAGGGATGAAGCAAAAGGTTATGATTGTCTGCGCCTTTATGATTGATCCTCATTTGTTTATCGTTGATGAGCCATTT
TTGGGGCTAGATCCTTTGGCGATTTCTGATTTGACGGATTTGCTAGCGCAGGAAAAATCAAAAGGCAAAGCTATTTTGAT
GTCAACACACGTGCTAGATGCTGCTGAAAAAATGTGTGATCGATTTGTGATTTTGCATCATGGTCAAGTGCGTGCAATGG
GAAATCTAGCTGAATTGCGTCAAGCTTTTGGAAAAGAAGATGCTAGTTTGAACGATATTTACATGGCTTTAACTAAAGAG
GGATAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G8I0X0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

77.824

99.17

0.772
  pptA Streptococcus thermophilus LMD-9

76.569

99.17

0.759

Multiple sequence alignment