Detailed information NTG0409358

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: H0272_RS02390
• Genome accession: NZ_CP059281
• Coordinates: 483362..484345 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain C9
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 478362..489345

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0272_RS02360 (H0272_02360)	-	478630..478737 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
H0272_RS02365 (H0272_02365)	yhjV	479213..480484 (+)	1272	WP_001545666.1	amino acid permease	-
H0272_RS02370 (H0272_02370)	-	480501..481508 (-)	1008	WP_001262467.1	HipA domain-containing protein	-
H0272_RS02375 (H0272_02375)	-	481508..481819 (-)	312	WP_001312177.1	HipA N-terminal domain-containing protein	-
H0272_RS02380 (H0272_02380)	-	481804..482127 (-)	324	WP_000563102.1	helix-turn-helix transcriptional regulator	-
H0272_RS02385 (H0272_02385)	dppF	482352..483365 (-)	1014	WP_000103572.1	dipeptide ABC transporter ATP-binding subunit DppF	-
H0272_RS02390 (H0272_02390)	amiE	483362..484345 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
H0272_RS02395 (H0272_02395)	dppC	484356..485258 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
H0272_RS02400 (H0272_02400)	dppB	485268..486287 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
H0272_RS02405 (H0272_02405)	dppA	486594..488201 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=409358 H0272_RS02390 WP_001196477.1 483362..484345(-) (amiE) [Escherichia coli strain C9]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=409358 H0272_RS02390 WP_001196477.1 483362..484345(-) (amiE) [Escherichia coli strain C9]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404