Detailed information NTG0409347

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: H0271_RS23815
• Genome accession: NZ_CP059279
• Coordinates: 4936526..4937509 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain C7
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4931526..4942509

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0271_RS23785 (H0271_23785)	-	4931794..4931901 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
H0271_RS23790 (H0271_23790)	yhjV	4932377..4933648 (+)	1272	WP_001545666.1	amino acid permease	-
H0271_RS23795 (H0271_23795)	-	4933665..4934672 (-)	1008	WP_001262467.1	HipA domain-containing protein	-
H0271_RS23800 (H0271_23800)	-	4934672..4934983 (-)	312	WP_001312177.1	HipA N-terminal domain-containing protein	-
H0271_RS23805 (H0271_23805)	-	4934968..4935291 (-)	324	WP_000563102.1	helix-turn-helix transcriptional regulator	-
H0271_RS23810 (H0271_23810)	dppF	4935516..4936529 (-)	1014	WP_000103572.1	dipeptide ABC transporter ATP-binding subunit DppF	-
H0271_RS23815 (H0271_23815)	amiE	4936526..4937509 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
H0271_RS23820 (H0271_23820)	dppC	4937520..4938422 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
H0271_RS23825 (H0271_23825)	dppB	4938432..4939451 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
H0271_RS23830 (H0271_23830)	dppA	4939758..4941365 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=409347 H0271_RS23815 WP_001196477.1 4936526..4937509(-) (amiE) [Escherichia coli strain C7]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=409347 H0271_RS23815 WP_001196477.1 4936526..4937509(-) (amiE) [Escherichia coli strain C7]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404