Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | GQO96_RS10010 | Genome accession | NZ_CP046898 |
| Coordinates | 2106864..2107244 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain A1429 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2101864..2112244
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQO96_RS09980 (GQO96_09940) | tadA | 2101983..2102486 (-) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
| GQO96_RS09985 (GQO96_09945) | - | 2102493..2103617 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| GQO96_RS09990 (GQO96_09950) | ung | 2103614..2104327 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| GQO96_RS09995 (GQO96_09955) | - | 2104378..2104974 (-) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| GQO96_RS10000 (GQO96_09960) | gspK | 2105204..2106163 (-) | 960 | WP_032030217.1 | type II secretion system minor pseudopilin GspK | - |
| GQO96_RS10005 (GQO96_09965) | xcpW | 2106163..2106864 (-) | 702 | WP_032030215.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| GQO96_RS10010 (GQO96_09970) | xcpV | 2106864..2107244 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| GQO96_RS10015 (GQO96_09975) | - | 2107234..2107788 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| GQO96_RS10020 (GQO96_09980) | - | 2107798..2108406 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| GQO96_RS10025 (GQO96_09985) | - | 2108444..2109217 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| GQO96_RS10030 (GQO96_09990) | - | 2109235..2109576 (-) | 342 | WP_032030213.1 | PilZ domain-containing protein | - |
| GQO96_RS10035 (GQO96_09995) | - | 2109588..2110568 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| GQO96_RS10040 (GQO96_10000) | kdsB | 2110580..2111341 (-) | 762 | WP_000680698.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=409186 GQO96_RS10010 WP_000836911.1 2106864..2107244(-) (xcpV) [Acinetobacter baumannii strain A1429]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=409186 GQO96_RS10010 WP_000836911.1 2106864..2107244(-) (xcpV) [Acinetobacter baumannii strain A1429]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |