Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   GP482_RS00590 Genome accession   NZ_CP046875
Coordinates   110290..111015 (+) Length   241 a.a.
NCBI ID   WP_039695964.1    Uniprot ID   A0A091BT83
Organism   Streptococcus ruminicola strain CNU_77-61     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 105290..116015
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GP482_RS00560 (GP482_00560) - 105689..107110 (+) 1422 WP_039695970.1 NCS2 family permease -
  GP482_RS00565 (GP482_00565) tsaE 107287..107730 (+) 444 WP_039695969.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  GP482_RS00570 (GP482_00570) - 107723..108235 (+) 513 WP_158913192.1 GNAT family protein -
  GP482_RS00575 (GP482_00575) - 108246..109418 (+) 1173 WP_039695967.1 LCP family protein -
  GP482_RS00580 (GP482_00580) - 109505..109810 (-) 306 WP_039695966.1 hypothetical protein -
  GP482_RS00585 (GP482_00585) - 109807..110226 (-) 420 WP_074565143.1 HIT family protein -
  GP482_RS00590 (GP482_00590) pptA 110290..111015 (+) 726 WP_039695964.1 ABC transporter ATP-binding protein Regulator
  GP482_RS00595 (GP482_00595) - 111018..112052 (+) 1035 WP_158913194.1 ABC transporter permease -
  GP482_RS00600 (GP482_00600) - 112105..112926 (+) 822 WP_158913196.1 phosphotransferase family protein -
  GP482_RS00605 (GP482_00605) trmB 112926..113564 (+) 639 WP_021141720.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  GP482_RS00615 (GP482_00615) - 113910..114935 (+) 1026 WP_157327720.1 diguanylate cyclase -
  GP482_RS00620 (GP482_00620) - 114941..116008 (+) 1068 WP_157328517.1 bifunctional glycosyltransferase family 2/GtrA family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26779.17 Da        Isoelectric Point: 4.7909

>NTDB_id=409095 GP482_RS00590 WP_039695964.1 110290..111015(+) (pptA) [Streptococcus ruminicola strain CNU_77-61]
MLKIENVTGGYINIPVLKNISFEVGDGELVGLIGLNGAGKSTTINEVIGLLTPYQGKITLDGLTLADNQAEYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLDFDEAMARAKELLKIFRLSDKLEWFPINFSKGMKQKVMIVCAFMIDPHLFIVDEPF
LGLDPLAISDLTDLLAQEKSKGKAILMSTHVLDAAEKMCDRFVILHHGQVRAMGNLAELRQAFGKEDASLNDIYMALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=409095 GP482_RS00590 WP_039695964.1 110290..111015(+) (pptA) [Streptococcus ruminicola strain CNU_77-61]
ATGTTAAAAATTGAAAATGTCACAGGTGGATACATTAATATCCCTGTTTTAAAAAATATTTCTTTTGAAGTTGGTGACGG
TGAGTTGGTTGGCTTGATTGGGCTAAATGGCGCTGGTAAGTCAACAACCATTAATGAAGTCATCGGACTTTTGACACCTT
ATCAAGGAAAGATTACCCTTGATGGTTTGACTTTGGCTGATAATCAAGCAGAGTACCGCAAAAAGATTGGTTTTATTCCT
GAAACGCCAAGCTTGTATGAAGAGTTGACTTTGCGTGAACACTTAGAGACAGTTGCCATGGCTTATGACCTTGATTTTGA
TGAAGCAATGGCGCGTGCCAAGGAATTGCTAAAAATTTTCCGTTTGTCTGATAAGCTTGAGTGGTTCCCGATTAATTTTT
CAAAAGGGATGAAGCAAAAGGTTATGATTGTCTGTGCTTTTATGATTGATCCGCATTTGTTTATCGTTGATGAGCCATTT
TTGGGGCTAGATCCTTTGGCGATTTCTGATTTGACAGATTTGCTAGCGCAGGAAAAATCAAAAGGCAAAGCTATTTTGAT
GTCAACGCACGTGCTAGATGCTGCTGAAAAAATGTGTGATCGATTTGTGATTTTGCATCACGGTCAAGTGCGTGCGATGG
GAAATCTAGCTGAATTGCGTCAAGCTTTTGGAAAAGAAGATGCTAGTTTGAACGATATCTACATGGCTTTAACTAAAGAG
GGATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A091BT83

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

77.406

99.17

0.768
  pptA Streptococcus thermophilus LMD-9

76.151

99.17

0.755

Multiple sequence alignment