Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   E3Z27_RS26545 Genome accession   NZ_CP046874
Coordinates   6072896..6073324 (-) Length   142 a.a.
NCBI ID   WP_047702438.1    Uniprot ID   A0AAX2D7B6
Organism   Pseudomonas mediterranea strain S58     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6067896..6078324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3Z27_RS26530 (E3Z27_26535) - 6069740..6071794 (-) 2055 WP_041023964.1 methyl-accepting chemotaxis protein -
  E3Z27_RS26535 (E3Z27_26540) - 6071934..6072473 (-) 540 WP_047702436.1 chemotaxis protein CheW -
  E3Z27_RS26540 (E3Z27_26545) pilH 6072484..6072849 (-) 366 WP_024778880.1 twitching motility response regulator PilH -
  E3Z27_RS26545 (E3Z27_26550) pilG 6072896..6073324 (-) 429 WP_047702438.1 response regulator Regulator
  E3Z27_RS26550 (E3Z27_26555) gshB 6073549..6074520 (+) 972 WP_047702439.1 glutathione synthase -
  E3Z27_RS26555 (E3Z27_26560) - 6074622..6075518 (+) 897 WP_159286078.1 energy transducer TonB -
  E3Z27_RS26560 (E3Z27_26565) - 6075704..6076273 (+) 570 WP_024778884.1 YqgE/AlgH family protein -
  E3Z27_RS26565 (E3Z27_26570) ruvX 6076273..6076710 (+) 438 WP_041023970.1 Holliday junction resolvase RuvX -
  E3Z27_RS26570 (E3Z27_26575) pyrR 6076793..6077299 (+) 507 WP_047702441.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15479.86 Da        Isoelectric Point: 7.4360

>NTDB_id=409083 E3Z27_RS26545 WP_047702438.1 6072896..6073324(-) (pilG) [Pseudomonas mediterranea strain S58]
MAEHPTQQQSSALKVMVIDDSKTIRRTAETLLRNVGCEVITAVDGFDALAKITDHHPGIIFVDIMMPRLDGYQTCALIKN
NSAFKATPVILLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLGAIQAHVPGFAAVQPHQAH

Nucleotide


Download         Length: 429 bp        

>NTDB_id=409083 E3Z27_RS26545 WP_047702438.1 6072896..6073324(-) (pilG) [Pseudomonas mediterranea strain S58]
ATGGCAGAGCATCCTACGCAGCAGCAATCCAGCGCCTTGAAGGTCATGGTCATCGACGATTCGAAGACCATTCGCCGTAC
CGCCGAAACCTTGCTGCGCAATGTGGGTTGCGAGGTGATCACGGCGGTCGATGGCTTCGATGCCCTGGCCAAGATTACCG
ACCATCATCCGGGCATCATCTTTGTCGACATCATGATGCCGCGTCTGGACGGTTACCAGACCTGCGCCCTGATCAAGAAC
AACAGCGCCTTCAAGGCCACGCCAGTGATCCTGCTGTCGTCCCGGGACGGGCTGTTCGACAAGGCCAAGGGACGTATCGT
CGGTTCCGATCAGTTTTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGCGCGATACAAGCTCATGTTCCGGGCTTTG
CCGCCGTCCAGCCGCACCAGGCACATTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76.271

83.099

0.634

Multiple sequence alignment